Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc347g00002 ATGGGGTTCGGATTAGATGCTGTGGTTTCAAAATTGCAAAATCTTGCCACTTCTGATCATTCCTCTGTGGTGTCCATGAACATCTTTGTTGCGCTTCTGTGTGGTTGTATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAGTCTATCACTGCCCTTTTGATTGGCGTTTGCACTGGTGTGTTCATTTTGCTGGTCAGTGGTGGTACACACTCGCATATTCTTGTCTTCAGTGAAGATCTTTTCTTCATATACCTTCTTCCACCTATAATATTCAATGCTGGGTTTCAAGTGAAAAAGAAGCAGTTCTTTGTTAACTTCATTACCATCATGATGTTTGGTGCAGTTGGTACATTAATATCTTGTACCATCATAACCTTCGGTGTTACACAAATTTTCAAGAGGATGGATATTGGTCCTATGGAAATTGGGGATTATCTAGCAATTGGTGCAATATTTGCAGCAACAGACTCTGTGTGCACATTGCAGGTGCTCAATCAAGATGAGACACCTTTATTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCCACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTTAATCAAATTGACCCGTCAATTGCTTTGCAATTTATTGGCAACTTCTTGTATCTGTTTCTCACAAGCACATTACTTGGAGTTGGGGCTGGGCTTCTTAGTGCTTATGTTATAAAGAAGCTGTATATTGGCAGACACTCTACTGATCGAGAGGTTGCTCTTATGATGCTCATGGCATACCTCTCCTACATGCTGGCTGAGTTGTGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGAATTGTTATGTCTCATTATACTTGGCATAATGTGACGGAGAGCTCAAGAATCACCACCAAGCATGCATTTGCAACTATATCGTTTGTTGCTGAGATCTTTCTCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGGTTTGTCAGTGATAGAGCAGCTTTGGTTTTCCCATTATCGTTCTTATCCAACTTGGCCAAAAAGTCATCAAGCGAGAAAATCACTTTCAGGCAGCAAGTGATTATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCATATAATCAGTTCACTATGTCCGGCCATACTCAACAGCAATCCAATGCTATCATGATTACCAGCACCATCACAGTTGTGCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAACCACTCATAATGATTTTGCTGCCTCCAAACCATCAAAAAGGCACAAGCACCACGAACATCACATTGAACACAGAACCACAAAGTCCAAAATCAGTTACTGTCCCACTTCTAGCCCAAGAATCTGAAGCTGATCTTGAAGGCCATGAAGTTGCTCGCCCGAGCAGTATTCGTAACTTGCTAACGAGGCCAACACACACCGTACATAGATTATGGCGCAAGTTCGACGATTCATTCATGCGACCCGTTTTCGGTGGCAGGGGTTTTGTTCCCGTGGAGCCTGGCTCACCGACCGAACGCAATGGCCATGCATGGCATTGA 1578 0.429 MGFGLDAVVSKLQNLATSDHSSVVSMNIFVALLCGCIVIGHLLEENRWMNESITALLIGVCTGVFILLVSGGTHSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMMFGAVGTLISCTIITFGVTQIFKRMDIGPMEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQIDPSIALQFIGNFLYLFLTSTLLGVGAGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATISFVAEIFLFLYVGMDALDIEKWRFVSDRAALVFPLSFLSNLAKKSSSEKITFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQQQSNAIMITSTITVVLFSTVVFGLMTKPLIMILLPPNHQKGTSTTNITLNTEPQSPKSVTVPLLAQESEADLEGHEVARPSSIRNLLTRPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPTERNGHAWH 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc347g00002 525 Gene3D - 145 197 - -
Stsc347g00002 525 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc347g00002 525 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc347g00002 525 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc347g00002 525 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc347g00002 525 PANTHER SODIUM/HYDROGEN EXCHANGER 16 503 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Stsc347g00002 525 Pfam Sodium/hydrogen exchanger family 28 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc347g00002 Stsc-Chr347 8084 14206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc347g00002 7 522 Antiporters AT3G05030 73.098 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc347g00002 - - gmx:100816746 868.996