Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3477g00001 ATGGCTCCTAAAAGAGGTGGAAAAGCGCTAGTTCCAACTTCGAAGAAGAAGCATGAGAAGGTTACGAACCCGTTGTTTGAGAAGCGTCCCAAGCAGTTTGGGATCGGAGGAGCATTGCCGCCAAAGAGGGATTTGACTCGTCTCGTGAAGTGGCCTAAGACCGTACAAATCCAGAGGAAGACGAAGATCCTCAAGCAGAGGGGTTACTTTCTTGATTACCTTTTGTTGATCTTACATGTAGCAACCAGCCTTTTCAAGATACTTCTGAAGTATAGGTCAGAAGGTAAAGCTAAAAAGAAGGAGCGGCTTTTGAAAAGGGCTCAGGCTGAGACTGAGGGCAAAACTGTTGAAGCTAAGAAGCCCACTGTTCTGAAGTATGTTATCTGGCTTCCAGCATTGTGTAGGAAGATGGAAATTCCATACTGCATTGTCAAGGGCAAGGTTTGCCTCGGATCG 456 0.4627 MAPKRGGKALVPTSKKKHEKVTNPLFEKRPKQFGIGGALPPKRDLTRLVKWPKTVQIQRKTKILKQRGYFLDYLLLILHVATSLFKILLKYRSEGKAKKKERLLKRAQAETEGKTVEAKKPTVLKYVIWLPALCRKMEIPYCIVKGKVCLGS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3477g00001 152 Gene3D - 126 152 IPR029064 -
Stsc3477g00001 152 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Stsc3477g00001 152 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Stsc3477g00001 152 SUPERFAMILY L30e-like 123 151 IPR029064 -
Stsc3477g00001 152 MobiDBLite consensus disorder prediction 1 23 - -
Stsc3477g00001 152 ProSitePatterns Ribosomal protein L7Ae signature. 134 151 IPR004037 GO:0042254|GO:1990904
Stsc3477g00001 152 PRINTS Ribosomal protein L7A/RS6 family signature 141 152 IPR018492 -
Stsc3477g00001 152 PRINTS Ribosomal protein L7A/RS6 family signature 131 141 IPR018492 -
Stsc3477g00001 152 Gene3D - 51 125 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3477g00001 Stsc-Chr3477 848 2273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3477g00001 1 152 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 56.757 2.94e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3477g00001 K02936 - jre:108984551 210.69