Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3463g00001 ATGGCTGCTCATGAAGAAAAAGGAAGATACAATCACAAGTTGGAAGCATGGAAGTCAGCTTTGTCTGAAGTAGGCAAGATTTATGGTCAACGCTGTGATAAGAATACACCTTGGGGCATGGCGATTGATAACATTGTTGAAGAGGTCACAAGAAGGCTTCCTCCCTTGCCTCTGTGTGTTGACCGTCCACTTGGACTTGATTCTGAACTTGAAGAGGTGAAATCAATTCTAGAGATTGATTCTTGTGCTGCCTGTTTCATGCTGGGAATTCATGGAGATGGTGATGAGATAAGCAAATTTGTTGCGGTGTTGTACAACAAGATTAGGCCTCACTTTGTAACTGCAAGTTTTCTTTCTAATATCAGTGAGAAAACAAGTGGAAGTGGTGGTGGCTTAGAAGATCTACAAGAGAGGCTTCTTTCTGAAATGGGAGAGGAGGTAAAGTCTAAGATTGGAAGCACATTCAAAGGATCCTCCGAAATAAAACGAAGACTAGGCCAAAAAAGAGTTCTTCTTGTTTTGGATGATGTAGATAGAATACAACAACTGAGTTCACTAGCAGGAGGAATTGATTGGTTTGGTCCTGGTAGTAGGATCATTATCACAACAAGATATGAAGATGTGCTAGATGATCATCTGTCATATAATGGTGTTGAAGTTAATAAATATTGCCTCACAGAAGGAAGTAGTTCAATTGTGAATGAAGAAAATGTAGTGGGATTGAAGAAAGATTTTGAAATTGTGATTAATCAACTCAAAGAAGATTCTCCAGGGAATGTTGTTTCAATTGTTGGCATGGGAGGGTTAGGAAAGACTACCTTGGCGCGAAAGATCTATAATAGCGATGATGTGAAGAAGCTATTCCCTTGCCGTGCGTGGGCAACTGTTTCCAAGGAGTACAGTGCAAAGGAAGTTTTCAAAAGCCTTCTCAAGTGTCTGAAGCCATCCACATCTGAAGATTCAAGCAGTGAAGAGGAGCTGAAGCTGAAGGTGAGTAGATGTCTGCAAGGGAAAAAGTACTTGGTAGTCCTTGACGATGTTTGGGATCCTAAAGCATGGCGTAGTATAAAGAATTGTTTCCCAGAGAACAACAATGGTAGCATGATACTAGTAACTACTCGTAATGATCAGGTGGCTTATGTTTCAGAGTCAAAGGAACCTCATCACAACCTTTCCTTTATGCATAAAGAAGAAAGTTGGGAACTGTTTCGCAATGAGGTGTTCTGCAGAAAAAGCTGTCCTCCCGAGCTGGAATCTATTGGAAGATCAATTGCTGAAAGTTGCAAGGGTTTACCATTGGCTATCAAAACCACAGCTGGGCTTGTCGCGAAGAGGGAGAGATCAGAGGATGCTTGGGTAGAAATTATGAATTTACTCCCTTATTGGAGCATTGATGTGGAGGATAGTAGTGAGGTGATGGAGATTTTGAAGTTTAGCTATGATGATTTGCCCAACAAAATGAAGCCATGCTTTTTATATCTTGGGGTGTTTCCTGAGGATGATGAGATTTTTGTGAGAGACTTAATCCGTTTATGGATGGCAGAAGGCTTCATAGAGCCAATCCAAACCGGAAGATCAAAAACACCACCACAGCCTGAAGATATTGGTGAGCAATACTTGAAGGAGCTAGTGGATCGTAACTTGGTACAAGTAGTGAAGAGGAGGAGTGATGGCAAAGGTGTGAAAACATGTCAGATCCATGATCTCTTCCGAGAATTGTGCATATCAGAGAGCAACAAACCTGGCAACAATTCTCATAAATTATCCTTTCTCAGCAACCTTGGATCCTATGCATGTTTAGTAACATGTAATCAATCATGCACTTGTTCCTTGTTCGTTTATGGAAATGCAGAGGAGTGGTCACATCATATTCCAGAAGTTTGCCAAGTTAATGTGCTGTATGTTACACGTCTCGTTGATATAGATCGAGATGAGTATTTGAAGTGGTTGAAAAACTCCAAGTTCTTGAGAATGAACCATTCTGAATCGCATGAGTTATGTAAGCTTCAGAGTTTACAAACATTGCATACGGTCTACATTGAGAACCTAAGTATTGGGGGGTTAAAACAACTGAGACATCTTCGTATTGCATTTGGCGTGAGTTTATTAGCAGAAGAACAAGTAATAAAAGATAAAATGAAGAGTCTCCAAACCCTATGTTATGTGTATGCCGATTCACAACTCGGGAGCTTACTCGACAATGGCTGCTTTCCCAACTTGAGAACACTTGGTCTATATATAATTAATGAGCACCCAGGTTCAGCAGAAGAAAACTTGAAGAGCCTGCACCGCCTAACAAATCTACGTAAGCTGAGACTTGGGTACGAACAACATAGTTGGATTCCATTAGACAGAATTGCATTTCCGTCAAATCTTACCAAGATTACCTTGGTAGACTTTAGGGATTTGAATTCTAAAGATATGAATAACCTGGGACGAATTCCTAGCCTTAAGATTTTAAAGCTGAATCGTGGACATTGTGAGGAAGAAACTCTTTGTTGCGGTACTGCTGGGAGCTTTCCGCAGCTTCAAGTGTTTATCATGATAACGGTGAGTATCACGCGTCTTACATCAGAAGAAGGTGCGATGCCTCGTCTTCGACGTGCAGTCATCTATGACTGCACTGACTTGAAGGAGGTTACTAAACAAATGTCTTCCTTGGGTAGTAACTTGAAGTTTCTAAAGTATCATTATGGCTATCGTTATGACTTGGTATATTGA 2721 0.4076 MAAHEEKGRYNHKLEAWKSALSEVGKIYGQRCDKNTPWGMAIDNIVEEVTRRLPPLPLCVDRPLGLDSELEEVKSILEIDSCAACFMLGIHGDGDEISKFVAVLYNKIRPHFVTASFLSNISEKTSGSGGGLEDLQERLLSEMGEEVKSKIGSTFKGSSEIKRRLGQKRVLLVLDDVDRIQQLSSLAGGIDWFGPGSRIIITTRYEDVLDDHLSYNGVEVNKYCLTEGSSSIVNEENVVGLKKDFEIVINQLKEDSPGNVVSIVGMGGLGKTTLARKIYNSDDVKKLFPCRAWATVSKEYSAKEVFKSLLKCLKPSTSEDSSSEEELKLKVSRCLQGKKYLVVLDDVWDPKAWRSIKNCFPENNNGSMILVTTRNDQVAYVSESKEPHHNLSFMHKEESWELFRNEVFCRKSCPPELESIGRSIAESCKGLPLAIKTTAGLVAKRERSEDAWVEIMNLLPYWSIDVEDSSEVMEILKFSYDDLPNKMKPCFLYLGVFPEDDEIFVRDLIRLWMAEGFIEPIQTGRSKTPPQPEDIGEQYLKELVDRNLVQVVKRRSDGKGVKTCQIHDLFRELCISESNKPGNNSHKLSFLSNLGSYACLVTCNQSCTCSLFVYGNAEEWSHHIPEVCQVNVLYVTRLVDIDRDEYLKWLKNSKFLRMNHSESHELCKLQSLQTLHTVYIENLSIGGLKQLRHLRIAFGVSLLAEEQVIKDKMKSLQTLCYVYADSQLGSLLDNGCFPNLRTLGLYIINEHPGSAEENLKSLHRLTNLRKLRLGYEQHSWIPLDRIAFPSNLTKITLVDFRDLNSKDMNNLGRIPSLKILKLNRGHCEEETLCCGTAGSFPQLQVFIMITVSITRLTSEEGAMPRLRRAVIYDCTDLKEVTKQMSSLGSNLKFLKYHYGYRYDLVY 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3463g00001 906 FunFam Probable disease resistance protein At1g61300 221 387 - -
Stsc3463g00001 906 Gene3D - 47 215 IPR027417 -
Stsc3463g00001 906 Gene3D - 224 386 IPR027417 -
Stsc3463g00001 906 PRINTS Disease resistance protein signature 428 442 - -
Stsc3463g00001 906 PRINTS Disease resistance protein signature 260 275 - -
Stsc3463g00001 906 PRINTS Disease resistance protein signature 334 348 - -
Stsc3463g00001 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 494 IPR027417 -
Stsc3463g00001 906 Gene3D Ribonuclease Inhibitor 629 898 IPR032675 -
Stsc3463g00001 906 Gene3D - 394 484 IPR042197 -
Stsc3463g00001 906 FunFam Probable disease resistance protein At1g63360 480 576 - -
Stsc3463g00001 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 217 IPR027417 -
Stsc3463g00001 906 Gene3D - 485 575 IPR036388 -
Stsc3463g00001 906 Pfam NB-ARC domain 243 482 IPR002182 GO:0043531
Stsc3463g00001 906 Pfam NB-ARC domain 133 214 IPR002182 GO:0043531
Stsc3463g00001 906 PANTHER DISEASE RESISTANCE PROTEIN RP 239 848 IPR044974 GO:0006952
Stsc3463g00001 906 SUPERFAMILY L domain-like 566 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3463g00001 Stsc-Chr3463 8 3053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3463g00001 17 209 WRKY Transcription Factor Family AT4G12020 27.551 6.46e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3463g00001 - - adu:107486433 1288.48