Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc344g00002 ATGTATGATAACACCAGTGAACAACAAAAACAGCTCACGATCCTCGTGATCGATGAGCAAACTCCTCTTCTACTATCAGAGACAAAGACCGCCGGAGGCCACCCGGAGGCATCATTTACAGGGTCGGTGTTCAATTTGTCAACGACCATCATCGGTGCTGGGATCATGGCCTTACCGGCTACCATGAAGGTTCTAGGCCTTGCCTTGGGGGTTGCTGCCATCGTTGTTCTTGCTCTTCTTGCTGAGTACTCTTTGGAGGTTCTAATGAGGTTCAGCAAAGTGGGGAATGCTGTAACTTATTCTCAAGTCATGGAGTATGCATTTGGACGTGTTGGTAGAAGGCTGTTTCAGATATGTATCTTTGTCAACAATTTTGGAATACTTGTTGTCTACATGATTATAATTGGCGATGTGCTATCTGGAACTTGGAGAAGTGAAATTCATCATTTTGGTGTATTAGAGGGATGGTTTGGTGAACATTGGTGGACTATGAGAACTTTTGTTCTTCTTATGACAACGCTTTTTGTTCTTGCACCATTGGCATTCTTTAAGCATATAGATTCATTGCGATATACTTCTGCTATTGCAGTAGCTTTGGCATTTGTTTTTCTAGTCATACTTGTGGGAATCACATTTATGAAATTATTTAATGGCAGCATCACTAGCCCAAGGTTGCTTCCAAATATTAGAGATATGAATTCTATATGGAATCTCTTTACAGCAGTTCCAATTCTTGTGAATGGATTTGTTTGCCATTCCAATGTGCACACAATAAACATGGAGCTAGAAGACTCTTCCCAAATCCAACCAGTTGTACGTGCATCATTAGTTTTGAGTTCAATCATATATATTCTTACTGCCATATTTGGTTTCCTTCTATTTGGTGAATCCACTCTTGACGATGTGCTCGCCAATTTTGATATTGACCTTGGAATCCCATACAGCAGTGTACTGAACGATGTCGTTCGCATTAGTTATGCCTTCCACCTTATGCTTGTGTTTCCCGTTATCTTCTTTTCGCTACGCTTTAACTTTGATGAATTTATCTCTGCTTCTTCATCATCTAAGTCTTTGAATGTGTTGTCAAGTAAGTTTAGGTTTGTTTCTGTCACCATTGGACTCGTTGCTTTAGTGTATATAGCTGCAAATTTTATGCCTAGCATATGGTACGCTCTACAATTCACAGGAGCAACTGCCACAGTTTGTATTGGCTTTGTTTTCCCTGCTGCAATATCTATAAGGGATCCTCATGGAATTGCATCAAATAAGGATAAGATTTTATCCATTGTCATGATTGTTCTTGCTGTGTTCTCAAATATTTTGGCCATATACAGTAATGCAGCTTCCTTATTATATGGAATAAGTGAATAA 1371 0.3953 MYDNTSEQQKQLTILVIDEQTPLLLSETKTAGGHPEASFTGSVFNLSTTIIGAGIMALPATMKVLGLALGVAAIVVLALLAEYSLEVLMRFSKVGNAVTYSQVMEYAFGRVGRRLFQICIFVNNFGILVVYMIIIGDVLSGTWRSEIHHFGVLEGWFGEHWWTMRTFVLLMTTLFVLAPLAFFKHIDSLRYTSAIAVALAFVFLVILVGITFMKLFNGSITSPRLLPNIRDMNSIWNLFTAVPILVNGFVCHSNVHTINMELEDSSQIQPVVRASLVLSSIIYILTAIFGFLLFGESTLDDVLANFDIDLGIPYSSVLNDVVRISYAFHLMLVFPVIFFSLRFNFDEFISASSSSKSLNVLSSKFRFVSVTIGLVALVYIAANFMPSIWYALQFTGATATVCIGFVFPAAISIRDPHGIASNKDKILSIVMIVLAVFSNILAIYSNAASLLYGISE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc344g00002 456 PANTHER AMINO ACID TRANSPORTER 31 438 - -
Stsc344g00002 456 Pfam Transmembrane amino acid transporter protein 37 448 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc344g00002 Stsc-Chr344 13335 21650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc344g00002 18 450 Amino Acid or Auxin Permease AAAP Family AT3G30390 59.174 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc344g00002 K14207 - gmx:100778699 572.778