Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc34439g00001 GGAATCCCTCATCCTTATGATAAAACCAAGACGGAGGTTATTCATGATGCTCTCAAGGTTTTGAGGCTTCAGAAGAGACCAAAATTCTGCTTGCTTGGTAGATTATCATCTGAATTAAATAGGCAATGCGATCTCAATTGTGTGTGGGATTGGTTTTTGGGGATGGCAGGAACTGGAGGAGAAGAAGAAGAAAGGGAAGGCACATTTGTTGTAAAGAGAAGGAAGCAGTTGAGGGTGAAAGCTGAGAAGGTTGCTAAGGAGAATCTTGGCTCCCAAATTGATATACTTGCTCAAGTCAACAGAGCTGGCCTGAATTTACCACTAGCTAATTCCAAATCATTTCAGTCGCAAAGCCACCGGTTGCCGATGGTAGTGCAAAGTCCCATGAATTATCCCTTGCTTATGAGCGGTACTCCCTTCAGAAACTTGAACCTCCTCTTGTTCTTCAGGAGTTTGTCAACCATG 465 0.4366 GIPHPYDKTKTEVIHDALKVLRLQKRPKFCLLGRLSSELNRQCDLNCVWDWFLGMAGTGGEEEEREGTFVVKRRKQLRVKAEKVAKENLGSQIDILAQVNRAGLNLPLANSKSFQSQSHRLPMVVQSPMNYPLLMSGTPFRNLNLLLFFRSLSTM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc34439g00001 155 Gene3D Ribosomal protein L13 1 42 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc34439g00001 Stsc-Chr34439 28 894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc34439g00001 1 100 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 51.456 2.56e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc34439g00001 K02872 - gmx:100499978 91.2781