Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc343g00009 ATGCCTGCTGGTGGTGGTGTTGGCCAAACCATATGTGTAACCGGCGCCGGAGGTTTCATCGCCTCGTGGATGGTCAAACTTCTCCTTGAAAGAGGCTACTCTGTCAAAGGAACTCTCCGTAACCCAGATGATCCCAAGAATGGGCACTTGATGCAGTTGGAAGGAGCCGCGGAGAGGCTCACTCTTCACAAGGTCGACCTCCTTGACCTTGACTCTGTTAGAGCCGTCATTCACGGTTGCCATGGCGTCTTTCACACTGCTTCTCCCGTCACTGACAACCCTGAGGAAATGGTGGAGCCAGCAGTAAATGGAGCCAAGAATGTGATTATAGCGGCTGCGGAAGCTAAAGTGAGACGCGTAGTGTTCACTTCATCGATTGGCGCAGTGTACATGGACCCAGCGAGGAGCATCGACGAGGTGGTGGATGAATCCTGTTGGAGTGATCTAGAGCATTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGGCAGTGGCAGAAAAAGCAGCATGGGAAGAGGCAAAGGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCAGTGTTGGTGCTAGGACCATTGCTGCAGCCAAGCATAAACGCGAGCACAATTCACATCCTCAAGTACCTCACTGGCTCCGCCAAGACTTATGCCAATGCAACACAGGCCTATGTCCATGTCAGGGATGTCGCATTAGCTCACATTCTTGTCTACGAGACCCCTTCTGCTTCTGGTAGATACCTCTGCGCTGAAAGTTCCCTCCACCGCGGAGACCTCGTTCGCATTCTCGCCAACCATTTCCCTGACTACCCTCTTCCCACCAAGTGTTCCGATGAGAAGAATCCAAGAGCAAAGCCCTACACCTTCTCTAACCAAAAGCTGAAGGACTTGGGATTAGAATTCACACCAGTGAGTCAGTGTCTATATGAAACGGTTAAAAGCCTACAGGAGAAGGGCCACCTTCCTATTCCCAAAAAGGAAGAAGATTCTGTTCAAGTTGAATAG 1002 0.509 MPAGGGVGQTICVTGAGGFIASWMVKLLLERGYSVKGTLRNPDDPKNGHLMQLEGAAERLTLHKVDLLDLDSVRAVIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPARSIDEVVDESCWSDLEHCKNTKNWYCYGKAVAEKAAWEEAKEKGVDLVVVNPVLVLGPLLQPSINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYETPSASGRYLCAESSLHRGDLVRILANHFPDYPLPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPIPKKEEDSVQVE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc343g00009 333 Gene3D - 6 333 - -
Stsc343g00009 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Stsc343g00009 333 CDD FR_SDR_e 12 298 - -
Stsc343g00009 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 311 - -
Stsc343g00009 333 Pfam NAD dependent epimerase/dehydratase family 11 242 IPR001509 -
Stsc343g00009 333 FunFam Cinnamoyl-CoA reductase 1 3 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc343g00009 Stsc-Chr343 29934 32686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc343g00009 8 274 Monolignol Biosynthesis Gene Families AT1G80820 73.783 2.04e-140 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc343g00009 K09753 - gmx:100789070 581.252