Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc343g00003 ATGAGGAAACTGAGATTTAATCTAAAGGGACTAGGGCCGGTTCCTCCTCGTCCTCCTAGTGATGGGAGTGGGGGAATAAGGAGAAACAATAATGCATCAAAATCATTTAGGGTAGGAATGAGAAGGGGATCAAATGGGCTAAAAGTACTTGGCAGATCCCTGAAAAGTGGAGTGACGTGGGCGTCAGTGTTCCCAGAAGATCTAAAAGTTTCGGAGAGAAAAATATTTGACCCTCAAGACAAGACTCTTCTGCAGTGGAATAAATTCTTTCAAATATTTGGTATCATATCTGTATCTCTTGATCCTCTTTTCTTTTATCTCCCATATTTCAATCACAAATCATACTGCCTCGCCATAGACAACCGCCTGGCACGCTATGCAGTTACACTCAGAACAATCTTCGATGCTATTTACATCCTTCGCATAAGTTTCCAATTTCGCACTGCTTTCATTGCCCCTTCTTCTCGTGTATTTGGACGAGGTGAACTCGTCATAGATCCTGCAGAGATTGCTAAGAGATATTTGCGACGTTACTTCATTGTTGACTTCCTCTCTGTCTTGCCTTTGCCACAGATTGTTGTGTGGAGATATCTTCATGATCCAGCTCGCACAAAGATAACGGGGTCTGTATGGTACTTATTAGCTGTAGAACGTAATGACACATGCTGGAGGGATGCTTGCATGGAGCAAGAGCTGTGTTTTACGCATTTCTTGTACTGTGGGGGTTCCAATAAGCGTGCTACTGGCTATGAAGAATGGAGAAAAATTAGCCCAAAGATTCTTAAGTCTAAATGCTCCGCTGATGATGATGAAGCCCCTTTTGACTATGGAATTTTCAATCAAGCCATAACATCTAATATTGTTGCATCAATTAATTTCTTTCCTAAACTTTGTTACTGTTTATGGTGGGGTGTCCAAAACATAAGGTATATTCCTAATGAAGCGTTATTGTATTCTCAAGTTTTACTAAGCTAA 975 0.4092 MRKLRFNLKGLGPVPPRPPSDGSGGIRRNNNASKSFRVGMRRGSNGLKVLGRSLKSGVTWASVFPEDLKVSERKIFDPQDKTLLQWNKFFQIFGIISVSLDPLFFYLPYFNHKSYCLAIDNRLARYAVTLRTIFDAIYILRISFQFRTAFIAPSSRVFGRGELVIDPAEIAKRYLRRYFIVDFLSVLPLPQIVVWRYLHDPARTKITGSVWYLLAVERNDTCWRDACMEQELCFTHFLYCGGSNKRATGYEEWRKISPKILKSKCSADDDEAPFDYGIFNQAITSNIVASINFFPKLCYCLWWGVQNIRYIPNEALLYSQVLLS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc343g00003 324 SUPERFAMILY Voltage-gated potassium channels 78 196 - -
Stsc343g00003 324 MobiDBLite consensus disorder prediction 9 31 - -
Stsc343g00003 324 Pfam Ion transport protein 86 194 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Stsc343g00003 324 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 205 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc343g00003 Stsc-Chr343 12923 14273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc343g00003 26 308 Ion Channels AT5G57940 49.415 3.63e-103 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc343g00003 K05391 - gmx:100810453 401.749