Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc341g00003 ATGAACTTGGACACCATTCTCAAGGCCAAGAAAGAATCTATAAGCATTGCAATTGCTGGAATAATCTTTCCATTTCTTACAGGATCAGGATTATATGCATTGCATAGAAAATTTTATATCAATAATAACAGTTTCCACCTTGAAGAAATCTCAACTCATGCTTATTTAATGTGGAGTTTAATTCTCACAGTCACAGGTTTTCCAAACCTAGTTGAAATCCTCTCAGAGCTCAAGCTTCATTACACTGGCTTAGGCAAAGTAGCATTAACCGCAGCCATGATCAGTGACACTTACAATTGGATTCTTTTCGCATTGCTAATTCCATTTTCATCACTTGATATTTCTAATGCGATTTATTCAATTATAAGCACAAGCTTATTCATTGTTGTGTGCATTTTTTTGGTTCGTCCTATAATCACAAAGTACCTTGAACAGAAAACAGAGGAGAATGAATTGGATGAGTATGTACTCCTTTTTGTGGTGATGGGGCTTTTGTTGTGTTCAAATATTACAGACATTCTAGGAACACATGACATTGTTGGTGCTTTTGTGTACGGACTAATTTTGCCTCATGGGAAGTTTGCTGACTTTGTTATGTCTGTTTCTGATGATTTTGGTGGGGGATTTCTAGCATCAGTTTACTTTTCTGGAACTGGGATGAGGTTTATGATTAAATCTGTTCTTACTCATGCAAATTGGGCACTGTCATTGCTAGTTGTCTTGTTGTTATGTGTGACAAAGATATTAGGTACTTTGTTTGCCACCTTCTTATTTGGTAGGCCAACTAAAGATGGTTTTGCCATTGGATTGCTTCTCAACACCAAGGGTGCCTTGGCACTAATATTGCTAAGCATTGCTTGGGATAAACTGATCTTTTTTGTGCCAACTTATGCTGTCCTCACTACTTCTGTTCTTCTAATGACTATGGTAGTTTCTCCAATCATTAACATGATCTTCAAGCCAAGAAAGCGATTTCAACAAACTAAGCTAAGGACCATACAAAAGCTAAGACTTGATGCAGAGCTCAGAATTGTGGCATGTGTCCATTCTAATTCCCACGCTACTAGCATCATCAACCTCATTGAACTCTTCAATGCCACCAGACTTTCCCCAATCTACATTTTCAGCTTGTACCTCGTCGAAATTACAAATCGTGCCACTGCTCTTGTTGTTGCTCACATGGAGAAGCCTACTCCCAAGCTTGGAACTCAGAACACTCTCACCGAGTCTCAAGTCGAGTTGGAAAATATTACATTTAACTTTCATTCTTTTGGGAATAGGGACGATCGTGATGCTTTCACGGTCCAGACCACAAGCGTCGTCTCGGCCTATGAAACCATTCATGAAGATGTATTCAACTCTGCAAGAGAACGAGGCGCAAGCTTGATTCTCTTACCATTCCACAAACATTTAAGTCCCAATGGGAATCTTCTTGAAACCACGAATGCAGTGTATAGGGATATCAACAAGAACGTAATGCAAGACGCGCCTTGTTCTGTTGGAATCTTCGTGGATCGGAATCTTGGATCGTTCCCGAAAACAAACCTTAGAATTTTTATGCTCTTCGTTGGAGGCCCAAACGATCGCGAAGCTTTGGCCATCGCGTGGAAGATGGCTAAGCATCGTAACGTTCAGCTATCGATGATTCGAATTTGTTTGACCGATGAAGCTGCAGAAGTGGATCAATCAGTTCATTCTGAAGAAGCACTACAGGGGATGTTATCTTATGTGATGGATAATGAGAAGCAGAAAGAGTTGGATGAAGAGTATATAAATAAATTCAGATATAGTGCTGTGAACAATGAGGATTCTATATCTTACTCAGAGGTTGATATCCGTACAGGTGAAGATGTGCCTAGAATCTTGAAGGAGGTTGATCAACAAGGTTGTGATTTATACATTGTTGGACAAGGGAATGGAAGGAACTCTAGAATCTTCTCAAACTTGTTGGAATGGTGTGAGTGTTTGGAATTAGGGGTTATTGGGGACATTTTAGCATCGAATATTTTTGGTTCAAGCTCGTCTGTTTTAGTTGTTCAGCAATATGGTTTTGGAGGAATGCAATTTGGGAAGAATAATAATGCTTTTGGATCCCTCCTCGTGAAGACAGAATAA 2115 0.3953 MNLDTILKAKKESISIAIAGIIFPFLTGSGLYALHRKFYINNNSFHLEEISTHAYLMWSLILTVTGFPNLVEILSELKLHYTGLGKVALTAAMISDTYNWILFALLIPFSSLDISNAIYSIISTSLFIVVCIFLVRPIITKYLEQKTEENELDEYVLLFVVMGLLLCSNITDILGTHDIVGAFVYGLILPHGKFADFVMSVSDDFGGGFLASVYFSGTGMRFMIKSVLTHANWALSLLVVLLLCVTKILGTLFATFLFGRPTKDGFAIGLLLNTKGALALILLSIAWDKLIFFVPTYAVLTTSVLLMTMVVSPIINMIFKPRKRFQQTKLRTIQKLRLDAELRIVACVHSNSHATSIINLIELFNATRLSPIYIFSLYLVEITNRATALVVAHMEKPTPKLGTQNTLTESQVELENITFNFHSFGNRDDRDAFTVQTTSVVSAYETIHEDVFNSARERGASLILLPFHKHLSPNGNLLETTNAVYRDINKNVMQDAPCSVGIFVDRNLGSFPKTNLRIFMLFVGGPNDREALAIAWKMAKHRNVQLSMIRICLTDEAAEVDQSVHSEEALQGMLSYVMDNEKQKELDEEYINKFRYSAVNNEDSISYSEVDIRTGEDVPRILKEVDQQGCDLYIVGQGNGRNSRIFSNLLEWCECLELGVIGDILASNIFGSSSSVLVVQQYGFGGMQFGKNNNAFGSLLVKTE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc341g00003 704 Gene3D - 1 329 IPR038770 -
Stsc341g00003 704 CDD USP_Like 524 679 - -
Stsc341g00003 704 PANTHER CATION/H + ANTIPORTER 1 682 - -
Stsc341g00003 704 Pfam Sodium/hydrogen exchanger family 1 315 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc341g00003 Stsc-Chr341 36093 38838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc341g00003 1 682 Antiporter Super Family AT2G13620 36.364 4.50e-154 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc341g00003 - - adu:110272786 1083.17