Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc34084g00001 ATGGATATGCTTAGACCTCCGTTCTTGAAAACAGGTGAGCATAGAGCAGATGTGTCCTTCTTTGGGAACCCCAACATTATGCTTGTAAGCTGGTTGCAGATGCCATTGTATGAAGCAGATTTTGGTTGGGGAAAGCCACATTATTTTGGTCCAGGTGCTGTGGCTCCCATTGATGATGGGATTATTGCTCCATCCCCACATGGGCATGGCTCTATTCTTATCTTCATGCATTTTCAGATGGCGCACTTGCACAAGTTCATCAACCTCTTTTGGGATACTTTGCAATATCCTGGAAATCCAATTGCTTTTCCAGGAATTCCAAGTTCAAAGATTTAA 336 0.4315 MDMLRPPFLKTGEHRADVSFFGNPNIMLVSWLQMPLYEADFGWGKPHYFGPGAVAPIDDGIIAPSPHGHGSILIFMHFQMAHLHKFINLFWDTLQYPGNPIAFPGIPSSKI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc34084g00001 111 Gene3D - 6 93 IPR023213 -
Stsc34084g00001 111 Pfam Transferase family 22 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc34084g00001 Stsc-Chr34084 151 747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc34084g00001 21 92 Monolignol Biosynthesis Gene Families AT5G48930 33.333 2.07e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc34084g00001 K13065 - aip:107646786 119.012