Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33g00032 ATGGCATCATTCTTCTTGATCATCATGGTCTCAACATCATTGCTACTAATTCCCAACTCTGAAGGCAGAGAATTTTTGGTTGGAGGCAGTGAAGATTCATGGAAGGTTCCACTTCCATCACCAGATTTTCTCAACCATTGGGCCGGCACCCACCGCTTCCAAATCGGCGATGCTCTCATATTCAAATACAACAACATGACAGAATCAGTTCAAATTGTGCCTAAGAAGGACTATGAAAGTTGTTATGAGGAGGTTGGTGATGATCACCAGAGTTTCAATGATGGGAACACCAAAGTGATTTTGAGGAGTTCAGGGCCAATTTACTTCATAAGTGGACATAAGTCTCATTGCCACATGGGTTTGAAGCTTGTTGTGGTTGTTATGTCTGCCATGCACCACCACCAACAACCAACTTCTCCTAATCATTCATTGCCTCTGCCTCCCTCACCGTCGCCGCTGTCGAGTAATGAAGGTGCTCTTGCTTGCACTCCAGCCACCGAATTCATGATGGGTTTGGGAGTTTCATTGGTCATGCTGTTCTACCTCGTTAATTGA 555 0.4486 MASFFLIIMVSTSLLLIPNSEGREFLVGGSEDSWKVPLPSPDFLNHWAGTHRFQIGDALIFKYNNMTESVQIVPKKDYESCYEEVGDDHQSFNDGNTKVILRSSGPIYFISGHKSHCHMGLKLVVVVMSAMHHHQQPTSPNHSLPLPPSPSPLSSNEGALACTPATEFMMGLGVSLVMLFYLVN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33g00032 184 MobiDBLite consensus disorder prediction 135 157 - -
Stsc33g00032 184 ProSiteProfiles Phytocyanin domain profile. 23 129 IPR003245 GO:0009055
Stsc33g00032 184 PANTHER BLUE COPPER PROTEIN 24 137 IPR039391 GO:0009055
Stsc33g00032 184 FunFam Cupredoxin superfamily protein 22 133 - -
Stsc33g00032 184 Pfam Plastocyanin-like domain 34 120 IPR003245 GO:0009055
Stsc33g00032 184 SUPERFAMILY Cupredoxins 22 128 IPR008972 -
Stsc33g00032 184 Gene3D - 23 140 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33g00032 Stsc-Chr33 175099 175993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33g00032 20 173 Phytocyanin Superfamily AT5G57920 40.881 1.24e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33g00032 - - pcin:129298565 148.288