Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33g00031 ATGGCATTGTTGTTGATGATGATGATTGCAATAATATGTTCATCATCATCATCATGGTCATCCATGGCTGCAACAAGAGATCACCATCACCATCAGCAGCAAGAACAAGATAGAATAAGAGAACTCCCGGGTCAGCCACGTGTTGAATTCTCACAGTTCTCAGGATATGTAACTGTAAACAAGAAACATGGTAGAGCACTCTTCTATTGGCTCACAGAATCTTCTTCCTCTTCTCCCAACAACAAGCCTCTTCTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCATCAGTAGCATATGGGGCATCAGAGGAAATTGGCCCATTCAGGATAAACAAAACTGCCTCTTCTTTATATCTTAACAGATATGCTTGGAACACAGAAGCAAATGTTCTGTTTCTTGAATCACCTGCTGGTGTTGGTTTTTCATACACAAATACCAGCTCTGATCTCCTAACTTCTGGGGATGAAAGGACAGCTGAGGATGCACTGATTTTTCTAGTTAGATGGATGTCAAGATTTCCACAGTATAAATATAGAGACTTTTACATTGCTGGGGAGAGTTATGCAGGTCATTATGTGCCTCAGTTGGCTAAGAAAATCTATTATTATAATAAAGAACATCCCAACATCATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAACTACTATGATAGCATTGGAACTGTGACATATTGGTGGAGCCATGCTATGATATCAGATCATTCATACAAATCCATCATGAAATATTGTGATTTCACAGCACAGAACACTTCTCAAGAATGTAATGATGCTGTCAACAATGCTGTCAACAATGAATTTGGGAACATTGATCAATACAGTATCTATACCCCTACATGTCCAGCATCACAAAACAGCACTCTTAGGCGCATAAGGCTGAAGAGTACAATGTTTCATATGATTTCTGGCTATGATCCCTGTACTGAAAATTATGCAGAGACATATTATAATCTTCCTCAAGTGCAGAAAGCAATGCATGCAAATGTTACCAACATTCCTTATAAATGGACTGCCTGCAGTGATGTGCTCCTGAAAAATTGGAGGGACTCTGAATTTTCTATATTGCCCATATACAAAGAGTTAATTGCTGCTGGATTGAGAATCTGGGTTTTCAGTGGAGACACAGATTCAGTGGTTCCAGTTACAGCCACAAGGTTTTCACTCAACCATCTCAACCTTACCATTACAGCTCCTTGGTATCCATGGTACTCATCAGGTGGACAGGTAGGTGGATGGTCAGAGGTATATGATGGACTCACATTTGCAACAGTGAGAGGAGCTGGACATGAAGTACCATTGTTTCAGCCAGAGAGAGCTCACATTCTTTTCAAGTCATTCTTGGCAGGGAAGAACCTACCAGAGTCTTGA 1398 0.4063 MALLLMMMIAIICSSSSSWSSMAATRDHHHHQQQEQDRIRELPGQPRVEFSQFSGYVTVNKKHGRALFYWLTESSSSSPNNKPLLLWLNGGPGCSSVAYGASEEIGPFRINKTASSLYLNRYAWNTEANVLFLESPAGVGFSYTNTSSDLLTSGDERTAEDALIFLVRWMSRFPQYKYRDFYIAGESYAGHYVPQLAKKIYYYNKEHPNIINLKGFIVGNAVTDNYYDSIGTVTYWWSHAMISDHSYKSIMKYCDFTAQNTSQECNDAVNNAVNNEFGNIDQYSIYTPTCPASQNSTLRRIRLKSTMFHMISGYDPCTENYAETYYNLPQVQKAMHANVTNIPYKWTACSDVLLKNWRDSEFSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTITAPWYPWYSSGGQVGGWSEVYDGLTFATVRGAGHEVPLFQPERAHILFKSFLAGKNLPES 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33g00031 465 Gene3D - 364 459 - -
Stsc33g00031 465 FunFam Carboxypeptidase 313 462 - -
Stsc33g00031 465 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Stsc33g00031 465 Gene3D - 317 354 - -
Stsc33g00031 465 SUPERFAMILY alpha/beta-Hydrolases 34 462 IPR029058 -
Stsc33g00031 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 446 IPR001563 GO:0004185|GO:0006508
Stsc33g00031 465 FunFam Carboxypeptidase 364 459 - -
Stsc33g00031 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Stsc33g00031 465 Pfam Serine carboxypeptidase 44 458 IPR001563 GO:0004185|GO:0006508
Stsc33g00031 465 Gene3D alpha/beta hydrolase 33 292 IPR029058 -
Stsc33g00031 465 FunFam Carboxypeptidase 33 292 - -
Stsc33g00031 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Stsc33g00031 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Stsc33g00031 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Stsc33g00031 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33g00031 Stsc-Chr33 163678 166478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33g00031 322 462 Calmodulin-binding Proteins AT2G22960 28.873 7.55e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33g00031 K16297 - gmx:100783242 753.051