Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc339g00004 ATGAATAAAGCCATCAATTTTGCTTCAATTTTCTTACTCTTCACACTCTCTTCTCATCAATTTCTTCTTCGCGTTGCTTCATCCAATTCACCTATAAACTCGAACCAGTTTCAGGGATATGCAGATGAAAGAACTCTCAAATCGGAACAAGAGCATGTCCATGAAGTGCATTGTTCTAGAGAAAGGAGCAGGGCAGCTAGGAAAGTGATAGAGGAGTATTTGACACCATTTTTGGAGAAAGAAAACTATCAGCTTTCAAGCAAGTGCAGACTTCACCCTGAAAATGATATGTTCAGGGATCAAGAGGAGCATAAAATTTGCCTAGACTTTCATGACTGGCAGTGTGGATATTGTAAGAAAAGCTTCCTAGATGAGAAGTTTCTTGATCAGCATTTTGATAACAGACACTCCAATCTTCTCAATTCAAGTGATGGTAAGTGCTTGGCTGATTTATGTGGAGCATTGCATTGTGATGCTGTGATGAGTTCGAAGTCCTCTAGAAACAGGTGTAATCCAGCTGCTGCTACTAGGAACAAACACCTATGTGAGAGTCTTGCTGAGAGTTGTTTTCCTGTAAGTGATGGTCCATCTGCAAGTCGTCTTCACGAAATATTTTTGCACCAATTTTGTGAGGCCCATACCTGCTCAGGGAAACAGAAACCCTTCTCTAGAGGAGGCAAGGTACAAAAAAGCTTGTTCGTCATAGTTTCTGGAGCATTGATCTTGGTGTTACTTCCTTTGTTCTATCTTTTCCTTTATCTGATACAAAGAGATATGAAGAGTAGTACCCAAGAACTTCGCCACATCTCAAAATTGGGACGGAAAACAAAGCCAACATGA 840 0.4048 MNKAINFASIFLLFTLSSHQFLLRVASSNSPINSNQFQGYADERTLKSEQEHVHEVHCSRERSRAARKVIEEYLTPFLEKENYQLSSKCRLHPENDMFRDQEEHKICLDFHDWQCGYCKKSFLDEKFLDQHFDNRHSNLLNSSDGKCLADLCGALHCDAVMSSKSSRNRCNPAAATRNKHLCESLAESCFPVSDGPSASRLHEIFLHQFCEAHTCSGKQKPFSRGGKVQKSLFVIVSGALILVLLPLFYLFLYLIQRDMKSSTQELRHISKLGRKTKPT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc339g00004 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Stsc339g00004 279 SUPERFAMILY Expressed protein At2g23090/F21P24.15 109 138 - -
Stsc339g00004 279 PANTHER ZINC FINGER PROTEIN-RELATED 3 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc339g00004 Stsc-Chr339 12014 15038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc339g00004 38 279 C2H2 Transcription Factor Family AT5G63280 59.514 4.02e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc339g00004 - - lang:109362398 385.185