Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc338g00003 ATGAAGGTAGTGTATAAGGCATTTGATGAAGTGCTTGGAATGGAAGTGGCATGGAACCAAGTCAAACTTGGTGATGTTTTTGATTCACCAGAACAACTACAACGTCTTTATTCAGAGGTCCATCTTCTCAAGAACCTTGACCATGAATCCATCATGACCTTCCATGACTCTTGGATCGATGTCCATTGTAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTAAGAGAGTATAGAAAGAAGTACAAGAGAGTAGACATAAGAGCAATTAAGAATTGGGCAAGGCAGATTCTAAGTGGATTGGAGTATTTACACAGCCATGATCCACCAGTGATACACAGAGACCTCAAATGTGACAACATCTTTGTGAATGGCCATTTGGGTCAGCTCAAGATTGGTGACTTAGGCCTTGCTGCAATTCTTCGTGATGGGTCACAACATGCACACAGTGTCATTGGCACACCTGAATTCATGGCACCTGAATTGTATGAAGAGGAATACAATGAGCTTGTTGATGTCTATTCTTTTGGGATGTGTATGATTGAGTTGTTCACTTCTGAGTTCCCATACAGTGAATGCTCCAACCCTGCTCAAATTTACAAGAAAGTTATTTCAGGGAAGCTACCAAATGCCTATTACAGAATCAATGATTTGGAAGCCCAAAGATTTATAGGAAAGTGCTTGGCAAATGTCTCAGAGAGGTTGCCAGCAAAGGACCTCTTGTTGGACCCATTTTTGGCAGTGAACCAATTACCACTACCAAGCCCAAGACCAATAACAAGCCCAATTCCAAGCCCAAAATTACATCATTTCAATGCCAAAGAGAAGAAACCTTCAATCATGACTCAACAAAGGAAGGGCACAAACATGACAATAACAGGCTCCATGAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAAATCTCCAACCAAAGTGGGAGCACAAGAAACATATACTTCCCATTTGACACCATAAATGACACAGCCATTGATGTGGCAATGGAAATGGTTAAAGAACTTGAAATCAGTGACTTGGAACCAATGGAGATTGCTGAAATGATAGAAGAAGAGGTATCAGCTTTGGTTCCAACATGGTGGGGAAATTCTAATAAGTATCAAAGACAACATAGCTTTAGCTTTGAAGAAGAACAAGAACAAGATTATGATGATGATTATATTAGCAATAACAATGACAATAATCCTTTCTTCTCATTGTCTTCTCGATCTTCCTCTCATGGATCTCTCCCAATGCTTTACCAAAATATTACACACATTGGTGGAAATCATTATTGGCCTCAAGATGATCCCCTTATGAATGATGATGCAAGCTCTCAAAGTTCTTTGGATTCCTTCAAGTATTCCCATTTACATTACTGTGACGCAAGCAATGAAGAAAATGATCATGTTTCAAATCTAACCATCAACAATAACAAGTGCACAAGATTTTGCCCTAGAGAAGAGGTGGTGGGGGCTGATTTCACCAACCGGATATGCAACATGAGAATGGATCCTTGCAGGTATCATAAGAGCATGGTAGGGCATGGAATCCGAGGGCTAACTAGGATTCAATCATATGTTGATGTGAGGAGGCAACAAATACAAAGATCATTGGTGGAGGAGATACATAAAAGAAGGATGTTCAAGACTGTTAATGCCATTGAGAACATTGGATTTCAGAATCCCAAATAA 1701 0.3998 MKVVYKAFDEVLGMEVAWNQVKLGDVFDSPEQLQRLYSEVHLLKNLDHESIMTFHDSWIDVHCRTFNFITELFTSGTLREYRKKYKRVDIRAIKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQLKIGDLGLAAILRDGSQHAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCMIELFTSEFPYSECSNPAQIYKKVISGKLPNAYYRINDLEAQRFIGKCLANVSERLPAKDLLLDPFLAVNQLPLPSPRPITSPIPSPKLHHFNAKEKKPSIMTQQRKGTNMTITGSMNEEDDTVFLKVQISNQSGSTRNIYFPFDTINDTAIDVAMEMVKELEISDLEPMEIAEMIEEEVSALVPTWWGNSNKYQRQHSFSFEEEQEQDYDDDYISNNNDNNPFFSLSSRSSSHGSLPMLYQNITHIGGNHYWPQDDPLMNDDASSQSSLDSFKYSHLHYCDASNEENDHVSNLTINNNKCTRFCPREEVVGADFTNRICNMRMDPCRYHKSMVGHGIRGLTRIQSYVDVRRQQIQRSLVEEIHKRRMFKTVNAIENIGFQNPK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc338g00003 566 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 457 - -
Stsc338g00003 566 SUPERFAMILY Protein kinase-like (PK-like) 3 287 IPR011009 -
Stsc338g00003 566 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc338g00003 566 SMART serkin_6 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc338g00003 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Stsc338g00003 566 FunFam Probable serine/threonine-protein kinase WNK1 1 71 - -
Stsc338g00003 566 Pfam Protein kinase domain 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc338g00003 566 FunFam probable serine/threonine-protein kinase WNK9 73 254 - -
Stsc338g00003 566 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Stsc338g00003 566 Gene3D Transferase(Phosphotransferase) domain 1 73 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc338g00003 Stsc-Chr338 16094 20826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc338g00003 1 389 MAP Kinase Kinase Kinase AT3G51630 66.162 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc338g00003 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc338g00003 K08867 - gmx:100816187 778.859