Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33854g00001 CCTTTCTCCCCGTTCGTCGCCGTCCCTTCCTCTGCGCCGCTAGTCTTCTGCGTCGCCGTCTTCCTCCGTGTCGTTTGCCTCCACGCCGGTCTGAACGTGCTCCGCCCATTGTCGTCTTCCGTCGCCTTCTTCCCAGAACCACCGGCCGCACGCCACCATCCGGTTCCAACTCTTCCTCCTCCTCCTCCTTACCTCTCTGCTGCTGGAGGCGCAGTTCAAAGCCATAGAGATGGCCGCAGCTCCAGTCTGTCCCCTTTTCTGGTTCGAGTCTGTTCTCTCTGTATGGCGGATTCCGACGAAGTGGCAAAATCTGCTGAAAACCAGCAGACAGAGCAAGTGTGCAGTTTCTTCAGGAAACCAATTAATAGGAAGAATATAAGGAAACGTGTTATTGGTAGTGACGATGAGGGCGATGATTCAAAAGATGAAAACTCTTTGTTACATTCTCAGAAGAAGGCTTTGAAGCCTGACAATAAATTATACTTTTCAACTGGCCCCTCGAAAAGCGCTGCGTCTACTCAACCAAGTGAAGAATCTGAAAAAACAG 547 0.5137 PFSPFVAVPSSAPLVFCVAVFLRVVCLHAGLNVLRPLSSSVAFFPEPPAARHHPVPTLPPPPPYLSAAGGAVQSHRDGRSSSLSPFLVRVCSLCMADSDEVAKSAENQQTEQVCSFFRKPINRKNIRKRVIGSDDEGDDSKDENSLLHSQKKALKPDNKLYFSTGPSKSAASTQPSEESEKT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33854g00001 182 MobiDBLite consensus disorder prediction 128 155 - -
Stsc33854g00001 182 MobiDBLite consensus disorder prediction 128 182 - -
Stsc33854g00001 182 PANTHER ZINC FINGER PROTEIN 183 107 181 IPR039971 -
Stsc33854g00001 182 MobiDBLite consensus disorder prediction 162 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33854g00001 Stsc-Chr33854 61 1632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33854g00001 104 173 C2H2 Transcription Factor Family AT1G01350 57.143 6.09e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33854g00001 K13127 - gmx:100817146 116.316