Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3380g00001 ATGTCAACCCCAGACGTTAAATGTATTTCTACTCCAGCCAGCATAACACCGGCATTGCCTGCACCTAAGAGACATTTCCTGAGTCCAGATGATAACTCTTCCACCACTACTAGCAAGTTGGTTAGGCGTCCACCTCTATCAAGGTCATTGTTTGACGAAGAGCTTTTGGATGTTCTCCCTCAGAGTCTTCTGCAATCGATTAGAGAAAAGGAAATACAAGCAATGGAGGAAAGAGATCCAGCTATCTCACAAGTAAAGAGACGGAAAAGAATGATCGTCAGCCTACCTAAGATGTTTAACATGATCCACCTCTTGCTCCAGTCAATGAACCGTTCTGTTATCACGAAAGCGGAGCTTGTGAGCAAGATAATCTCTGGCAACTGTGGTATTGTTGATAGAAGTAAGGCTCTCTTGTATAATAGGAAGTGA 429 0.4336 MSTPDVKCISTPASITPALPAPKRHFLSPDDNSSTTTSKLVRRPPLSRSLFDEELLDVLPQSLLQSIREKEIQAMEERDPAISQVKRRKRMIVSLPKMFNMIHLLLQSMNRSVITKAELVSKIISGNCGIVDRSKALLYNRK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3380g00001 142 MobiDBLite consensus disorder prediction 28 43 - -
Stsc3380g00001 142 PANTHER DNA REPLICATION FACTOR CDT1 7 134 IPR045173 GO:0003677|GO:0030174|GO:0071163
Stsc3380g00001 142 Gene3D - 52 137 IPR038090 -
Stsc3380g00001 142 MobiDBLite consensus disorder prediction 1 43 - -
Stsc3380g00001 142 Pfam DNA replication factor Cdt1 C-terminal domain 62 133 IPR032054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3380g00001 Stsc-Chr3380 3418 4154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3380g00001 52 133 Core DNA Replication Machinery Family AT2G31270 54.878 3.90e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3380g00001 K10727 - cave:132166775 150.214