Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc337g00005 ATGGTTCAAAGAGGCTTTCTCAGTAAGCTTGGTATTCAAGATGATCATGTCATATCTGAGAAGAGCTTATCTTCTCCTCAACACCAAGATGGGAAGGGCAGAAAGAGTGACATCAAGAAGAAAAGCAAAAACTCAAGGTCAATTAAGCTTTCTGATTTGGAAGCTCTTCAAGCACCACTTCCAAGGAGGCAACCAGGAAAGGAACAACAGCCTCTTCGTGCTCCAACTGCAGCATCATCATCACTACAAAAGCATAAGCGTTTGGTGAGAATAGATGGCTCTCCCAATTATATGAAGCCCACAAGCAGTTCTGATGCAAAAAAGGAGAGTTTCTCGGTGAGTCTTCAAAACACTCAAAATGAAAAGCATTTGCCACAAAGATGTTCTAGTAGTTCAAGAGCTAGTTCCTTTTCTTGCAAAAAACAAGAAAAACCCTTGACTAGATCATCTAGTTTGAATTTGGTAAGATCATTGACAAAGACTACTACTTTCAAGCCTTATAGAACAAGTCCTAGAAAATCCACCGCAGCGATTTTGCATGCGAAAATGAATCCACCAGTGAGAGCTACTTGTTCTTCCACTTTGAAAGACTCTAGGTTCCCTGCATACCTGACACTTAACCCTGGGGGAAATGAATATGAAGGAACTTCAGTCATGAAAGTTTGCCCCTACAAATATTGCTCTCTCAATGGTCATTACCACGCTACCTTGTCTTCATTGAAGAGCTTTGTATCAGCAAAGAAGCGTATTCTGAAAAACCAGAAGAGTATGAAGCTGGAAACTCTGAGCCCTCAAAGATTGAAGATGCAGTGTCAGACAGACAACAATGATATTGAGCAAAATGCCAAGGATGCGAAACATGCACATAATGAAGCTGATAAAGACCTTGAAGATCAAGATGACATCAAGTCCGAGACTGAAGAAGATGGCGTCAAGTGTGTTATTCAAACTATAAATCATGCTCCTCCGAAGTGTGAGATTGATCATGAAGATGATTTCAGAGACTGGATTGCTGCTGCTGCAATTGAAGCAGATAAAAGAGGGAGCTCTCACCGAGAAACGAATGCTGCAGTTGCAGGTGTAAACTACTCAACTAGCTGGTTTGGTAAAGAAATATGTATGGGAAGTTATTCCAGTGAAGCTAGCTATGATGGTGAACAGATGCATAATATTGAATTTGATGGTTGTCATTCCCAGAATACTGATAATGTTGAATTGGATGGTTCTACTTACCAGGATACTGACATACAGTGGAAGGAGGAGGAGCAGTTCTTTTCATTTGGCAATGGAGAAAACATTGATTCTTCTATCTTCACAGGGGAGGAAAGTGACTCAAACTTTGAGTCCTTATCAGAGAGTTCACATGATGTTTCTGTGATGTGGTTAGATGACATACTTGCCAACCATCATGCGGATATTCTTGTAGAAGGAACACTCAGAGAAGCCAATGATGAAAAAGGCACCTATTTTGAAGCACAATCTGATGGCTCTAATTCTGTTTTGGAAGGTACATGTGAAAGCATGGAGCTTGAGACTCAAGAAAATGATTACCTGTCCAATGGCATAAGTTATGATCAACTTCCTCCAACAGACAATGAAGCGTTTCAGCACCTCACAGATGTAGATGATAGAGTAAATGAAAACTATGTAACAGAAAATTGCAAGGTTGAGAAGAGCTATGAAGATAGCAGCAGAAGCCTAGAGAATAATGAAGAAGGCATTAACCAATACAACCAAATTCACCCATCAGAGGTACCAGAAGAAAGCAATACTGCTGTTCAGGACCATGAACTATTGGAGGAAGATCAAGGTAACACTAGTAATTTCCAGAGCACAAGCTGTATAGGTGGTGAAGATCTTAACACGAGCAAGAAGTGGCCATGGGAAACAAAGCGCAAGAGACTAGAGCAAGATGATGAGCAAATGAGAAAGATTAAACCGCGAAAACCAAATTTCCTCCCCTTGGTTCCTGAACCAGAGCCAGAAAAGGTTAGCCTGAAGCATCAAATTATGGATGAAAGAAAAGATGCGGAGGAATGGATGCTTGATTATGCCNNNNNNNNNNTAGGAAGACGAAAGTGGCTTTGCTCGTTGAAGCTTATGAAACAGTAA 2112 0.4058 MVQRGFLSKLGIQDDHVISEKSLSSPQHQDGKGRKSDIKKKSKNSRSIKLSDLEALQAPLPRRQPGKEQQPLRAPTAASSSLQKHKRLVRIDGSPNYMKPTSSSDAKKESFSVSLQNTQNEKHLPQRCSSSSRASSFSCKKQEKPLTRSSSLNLVRSLTKTTTFKPYRTSPRKSTAAILHAKMNPPVRATCSSTLKDSRFPAYLTLNPGGNEYEGTSVMKVCPYKYCSLNGHYHATLSSLKSFVSAKKRILKNQKSMKLETLSPQRLKMQCQTDNNDIEQNAKDAKHAHNEADKDLEDQDDIKSETEEDGVKCVIQTINHAPPKCEIDHEDDFRDWIAAAAIEADKRGSSHRETNAAVAGVNYSTSWFGKEICMGSYSSEASYDGEQMHNIEFDGCHSQNTDNVELDGSTYQDTDIQWKEEEQFFSFGNGENIDSSIFTGEESDSNFESLSESSHDVSVMWLDDILANHHADILVEGTLREANDEKGTYFEAQSDGSNSVLEGTCESMELETQENDYLSNGISYDQLPPTDNEAFQHLTDVDDRVNENYVTENCKVEKSYEDSSRSLENNEEGINQYNQIHPSEVPEESNTAVQDHELLEEDQGNTSNFQSTSCIGGEDLNTSKKWPWETKRKRLEQDDEQMRKIKPRKPNFLPLVPEPEPEKVSLKHQIMDERKDAEEWMLDYAXXXXGRRKWLCSLKLMKQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc337g00005 703 MobiDBLite consensus disorder prediction 279 308 - -
Stsc337g00005 703 MobiDBLite consensus disorder prediction 27 48 - -
Stsc337g00005 703 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 685 IPR044681 GO:0005516
Stsc337g00005 703 SMART CaM_binding_2 601 697 IPR012417 GO:0005516
Stsc337g00005 703 Pfam Plant calmodulin-binding domain 626 685 IPR012417 GO:0005516
Stsc337g00005 703 Coils Coil 275 295 - -
Stsc337g00005 703 MobiDBLite consensus disorder prediction 277 308 - -
Stsc337g00005 703 MobiDBLite consensus disorder prediction 1 142 - -
Stsc337g00005 703 MobiDBLite consensus disorder prediction 96 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc337g00005 Stsc-Chr337 12060 14878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc337g00005 640 685 Calmodulin-binding Proteins AT2G38800 54.348 8.52e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc337g00005 - - adu:107476638 993.416