Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33742g00002 ATGGCTGAAACTACAACCAAATCAAACCCACCTACTTCATTGAAGAGTGAAGTTCACATGCCTAAAGCTAAAAACAAGGATAATAGACATAAAAGGTTTGGATCTGACAAGGAGGTACACACCCTGCCTTCAGGGAAGCAAAAAAGGCCGATACGTCCTGTTCGGAAAAGAGCAGAAGCATCTGAGATGCCTACCTCGGATAAAACAGGGAGCAGGTGTGACTGGAAAAACAGTCCTATTTGGTTTTCATTAGTTGCTTCAGAAGACCAGAAAGGAGATGTTCCATTGCCACAGATCTCAGCATGCTATTTAAGAATAAAGGATGGTACTGTGCCTGTGTCATTTATACAAAAGTATCTTGTGAAGAAACTTAATCTAACCAATGAAGCAGAGGTGGAAATAATGTGCCGGGGTCAGCCTGTGCTGCCGAATTTGCAGCTGCATAACTTGGTAGACTTGTGGTTCTGCACACCATCAGCGTCGAAGAAGATGCCAGCATCCGTGGGCTCGTCGGCTAAGGACTTTGTCATGGTTTTATCATATTGTCGAAAAGCCGTGCCTCACTGA 567 0.4427 MAETTTKSNPPTSLKSEVHMPKAKNKDNRHKRFGSDKEVHTLPSGKQKRPIRPVRKRAEASEMPTSDKTGSRCDWKNSPIWFSLVASEDQKGDVPLPQISACYLRIKDGTVPVSFIQKYLVKKLNLTNEAEVEIMCRGQPVLPNLQLHNLVDLWFCTPSASKKMPASVGSSAKDFVMVLSYCRKAVPH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33742g00002 188 MobiDBLite consensus disorder prediction 1 15 - -
Stsc33742g00002 188 Gene3D - 60 165 - -
Stsc33742g00002 188 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 7 185 IPR044807 GO:0004842
Stsc33742g00002 188 MobiDBLite consensus disorder prediction 19 45 - -
Stsc33742g00002 188 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33742g00002 Stsc-Chr33742 2350 3914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33742g00002 96 181 C3H Transcription Factor Family AT3G23060 48.837 2.03e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33742g00002 K16277 - gmx:100783999 273.863