Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc335g00005 ATGGTTTATGGACTTTTAGGTTTTCTTGTGCTGTCTTATGTGAGGCTTTTGTGGTTTTCTCTTCTTTCTTTATTTCTTGATCTATTCAGGTCACAGTCTGCTGAAATAGAAGAAATTGTCAAAGTGGTAACCAGCATATTAATTCCCAAACAATCATCAAGTCTATGTAATGATATAGTTGGGATGCACTCCCCTGTACAAGAACTTGAAAAGCTTCTAGTTTTGGACTCAGATGATGATGTTCGAGTTGTAGGAATTTGTGGAATGGGTGGTATAGGAAAGTCAACTATTGCCACAATTTTATATGAAAAAGCTTCTCATCAGTATGATGTTTCATGTTTTGTAGATGATGTAAGTAAAATTTACAGAGATTATGGTTCACTTGGTGTACAGAGGGAATTCCTTTGTCAAGCTTTCACGGAACAAAATTTTGCGTCATGCAATTTTTTGTTGGCAAATAATCTGATTCAAACTAGGTTACGCCATAGAAAGGTTCTCATAATTCTGGATAATGTTGATCAGGGGACTCAGTTGGAGAAGCTGGGTTTAAAACGGGAATGGGTAGGTAGAGGGAGTAGAATAATCATAGTTTCTAGAGATGAACATATTTTGAGAGAGTATGGAGCGGATGATGTTTACAAAGTTCAACTCTTAAGTGATGAGAATGTTATGTACCAGAGTAACTGGAGCAGAATAACACAACTAAAATTTAGAGTCGAGAAATAG 726 0.3609 MVYGLLGFLVLSYVRLLWFSLLSLFLDLFRSQSAEIEEIVKVVTSILIPKQSSSLCNDIVGMHSPVQELEKLLVLDSDDDVRVVGICGMGGIGKSTIATILYEKASHQYDVSCFVDDVSKIYRDYGSLGVQREFLCQAFTEQNFASCNFLLANNLIQTRLRHRKVLIILDNVDQGTQLEKLGLKREWVGRGSRIIIVSRDEHILREYGADDVYKVQLLSDENVMYQSNWSRITQLKFRVEK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc335g00005 241 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 217 IPR044974 GO:0006952
Stsc335g00005 241 Gene3D - 37 211 IPR027417 -
Stsc335g00005 241 PRINTS Disease resistance protein signature 159 173 - -
Stsc335g00005 241 PRINTS Disease resistance protein signature 83 98 - -
Stsc335g00005 241 Pfam NB-ARC domain 66 222 IPR002182 GO:0043531
Stsc335g00005 241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 224 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc335g00005 Stsc-Chr335 17521 18246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc335g00005 60 224 WRKY Transcription Factor Family AT5G45050 30.303 5.61e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc335g00005 - - adu:107476580 317.39