Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc334g00006 ATGGCTGCTTCCCATGTTGCTTTTCTTCATGCTTCTCCTCTTTCTCTTCCTATTCCCAACCAACGTTTCAGTTCCAAACAGCTTCACATAAATGGAATCAAACCCTTCTCTTCTTTTTCTTGGTGCTTCTGTTCACTTTCAACACAAAGAGGGTATTGTTTACCTGTGATTGCTTGTTCCTCTTCCAATGGAAGGGGCCCTAATAATAATAATAGTTCTAAGAATGATGGTGATGGTGTCAAGAGTGTTGAGAAGCTTCTTGAGGAGAAAAGAAGAGCTGAATTGTCTGCTAGGATTGCCTCTGGTGAATTCACAGTGAAGCAGCAATCTGGTTTAAGTTCTGTGTTGAAGAAGAGCTTGTTAAATGTGGGAGTTCCCAATGAGGTTGTGGAGTTTTTGCTCGGTTGGGCCGCTGGGGAAGGCGATTACCCCAAAATTCCCGAGGCAAAAGGGTCTATTGGTGCAATTAGAAGTGAGGCATTCTTCATTCCCTTGTATGAACTTTACCTCACATACGGCGGAATTTTCAGGTTGAGTTTTGGACCAAAGTCCTTTTTGATTGTATCCGATCCATCTATAGCAAAACACATCTTGAAAGACAATTCAAAGGCTTATTCGAAGGGTATCTTGGCTGAGATCCTAGAGTTTGTCATGGGGACAGGGCTCATCCCGGCTGATGGGGAAGTGTGGCGAGTTCGACGACGAACTATAGTCCCAGCATTGCATCAAAAGTATGTGGTGGCTATGATTAGCCTTTTTGGACAAGCAACAGATAGGCTCTGCAAGAAGCTAGATGCTGCTGCATCTGATGGGGAAGATGTCGAGATGGAATCACTTTTCTCTCGATTGACCTTGGACATCATTGGAAAGGCAGTATTCAATTACGATTTCGACAGTTTAACAAATGACACCGGTATAGTTGAGGCTGTATATACTGTGCTGAGGGAAGCAGAAGATCGAAGCGTTTCTCCGATTCCAGTGTGGGAGATCCCAATATGGAAAGACATATCTCCGCGTCAAAGGAAGGTTTCTGCAGCTCTCAAATTGGTCAATGATACACTTAATGAGCTGGTAGCAATATGCAAGAGATTGGTGGACGAAGAAGAGTTACAATTTCATGAGGAGTACATGAATGAGCAAGATCCAAGTATTCTGCATTTCTTGTTGGCATCAGGAGATGATGTGTCAAGTAAGCAACTCCGCGATGATTTAATGACAATGCTCATTGCTGGACATGAAACTTCAGCTGCTGTTTTAACTTGGACCTTCTATCTTCTATCAAAGGAGCCTAGAGTTGTGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTAGGGGATCGATTTCCAACTATCGAAGACATGAAGAAACTCCGATATACAACCCGAGTGATCAATGAGTCAATGAGGCTTTACCCTCAACCACCAGTGTTGATCCGTCGCTCTCTTGAGAATGATATGCTCGGAAAGTATCCTATAAAAAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGTAGTCCAAATCAATGGGATGATGCTGATAAGTTTCAACCGGAAAGATGGCCAGTAGATGGACCTAACCCCAACGAGACGAATCAAAACTTCAAGTATCTACCATTTGGTGGAGGACCACGGAAATGTGTTGGTGATTTGTTTGCTACATACGAGACCATAGTAGCACTTGCCATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCCCCACCGGTTGTGATGACTACTGGAGCAACAATTCATACAACACAAGGGTTGAAGATGACAGTTACAGGCAGAACAAAACCTCCAATTGTGCCTTCATTACAAATGTCAACAATGGAAATTGATCCATCCATGAGCAAAGAGGACACAAGTCAGAAAGGCGAAGTTTATCAGGCTCAGTCCTAA 1917 0.4335 MAASHVAFLHASPLSLPIPNQRFSSKQLHINGIKPFSSFSWCFCSLSTQRGYCLPVIACSSSNGRGPNNNNSSKNDGDGVKSVEKLLEEKRRAELSARIASGEFTVKQQSGLSSVLKKSLLNVGVPNEVVEFLLGWAAGEGDYPKIPEAKGSIGAIRSEAFFIPLYELYLTYGGIFRLSFGPKSFLIVSDPSIAKHILKDNSKAYSKGILAEILEFVMGTGLIPADGEVWRVRRRTIVPALHQKYVVAMISLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVSAALKLVNDTLNELVAICKRLVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVVSKLQEEVDSVLGDRFPTIEDMKKLRYTTRVINESMRLYPQPPVLIRRSLENDMLGKYPIKRGEDIFISVWNLHRSPNQWDDADKFQPERWPVDGPNPNETNQNFKYLPFGGGPRKCVGDLFATYETIVALAMLVRRFNFQMAVGAPPVVMTTGATIHTTQGLKMTVTGRTKPPIVPSLQMSTMEIDPSMSKEDTSQKGEVYQAQS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc334g00006 638 Pfam Cytochrome P450 166 585 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS E-class P450 group I signature 549 572 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS E-class P450 group I signature 169 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS E-class P450 group I signature 399 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS E-class P450 group I signature 501 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS E-class P450 group I signature 461 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS E-class P450 group I signature 539 549 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS E-class P450 group I signature 419 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 MobiDBLite consensus disorder prediction 618 638 - -
Stsc334g00006 638 SUPERFAMILY Cytochrome P450 158 602 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 Gene3D Cytochrome P450 144 610 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS P450 superfamily signature 549 560 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS P450 superfamily signature 410 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 PRINTS P450 superfamily signature 540 549 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc334g00006 638 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 542 551 IPR017972 GO:0005506|GO:0016705
Stsc334g00006 638 CDD CYP97 163 596 - -
Stsc334g00006 638 FunFam Carotene epsilon-monooxygenase, chloroplastic 147 604 - -
Stsc334g00006 638 PANTHER CYTOCHROME P450 FAMILY 4 172 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc334g00006 Stsc-Chr334 24572 29082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc334g00006 64 615 Cytochrome P450 AT1G31800 80.000 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc334g00006 K15747 - gmx:100791400 1009.59