Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc334g00001 GTGAATTTTTATAAACAGGTTGCTGAGGCCATAGTTGGGATCATTGTATGTAAGGCCAGTGATTCAATTTCTGTGTTTGATCAAATCAAATTAGTGACTATGGCCAATATAAAAGGAGCAGTGTTCATCTCAGATAATCCTGAACTAACTGAATGGGGCCATCTCTATTCTCCTAGCATTGTAATTACTTCCAAAGATGCCAAATCTGTTATCAATTATCTTCAAACCAACAAGAACCCTAAAGCCACCATCAATTTCCAACAAACATTTGTTGGAATCAAGCCATCACCAGTTGCTGCACATTATAGTTCAAGAGGGCCTTCACCTAGTTTTCCATGGATCCTAAAACCTGATATAATGGCACCAGGAACTAGGGTTTTAGCTGCTTATATTCCTCACAAAACAACCGCAACAATTGGCACAAATGTCTTCCTTTCGAGTCAATATAACTTTCAATCCGGAACTTCAATGGCTTGCCCTCATGTCTCCGCCGTGGCGGCGCTTCTTAAAGCAGCACGCCCCGAATGGAGCGTTGCTGCTATTAAGTCGGCGATAATGACTACTGCTAGTTTTCTTGACAACACAAATAATCCAATTAGGGATAATGCTAACCCTAACCCTAATGGATTTGCTTCACCCCTTGCAATTGGAGCCGGTGAGATTAACCCTAATAGAGCACTTGATCCAGGTTTGGTATATGATGCTACCCCACAAGATTATGTTAATCTCCTTTGTGGTATGAACTATAGTTCTGACCAAATACTAACAATTACTAGGTCAAGATCCTATAATTGTTCAAACCCATCACTTGATCTTAATTACCCTTCATTTATGGTCTTGTATAACAAATCAAGGATTCACAAGTTTAGGAGGACAGTGACTAATGTCGGAGATGGTGGTGGTACATATAGTGTTGAAGTGAGAGAACCAATGGGGTGTATGGTGACAGCGTTACCTAAGAAATTGGTATTCAAAGATAAGAATGAGAAGCAAAGCTATGAGGTTAACATAATGGTGCATATGAATGAAAATAATAATGTGTCATTTGGGGACATTGTTTGGGTTGAAGATGGTGGAAAACACTCCGTTAGGAGCCCCATTGTAGTGGCACCATTTGGAATTGTATGA 1128 0.3998 VNFYKQVAEAIVGIIVCKASDSISVFDQIKLVTMANIKGAVFISDNPELTEWGHLYSPSIVITSKDAKSVINYLQTNKNPKATINFQQTFVGIKPSPVAAHYSSRGPSPSFPWILKPDIMAPGTRVLAAYIPHKTTATIGTNVFLSSQYNFQSGTSMACPHVSAVAALLKAARPEWSVAAIKSAIMTTASFLDNTNNPIRDNANPNPNGFASPLAIGAGEINPNRALDPGLVYDATPQDYVNLLCGMNYSSDQILTITRSRSYNCSNPSLDLNYPSFMVLYNKSRIHKFRRTVTNVGDGGGTYSVEVREPMGCMVTALPKKLVFKDKNEKQSYEVNIMVHMNENNNVSFGDIVWVEDGGKHSVRSPIVVAPFGIV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc334g00001 375 Gene3D Peptidase S8/S53 domain 92 240 IPR036852 GO:0004252|GO:0006508
Stsc334g00001 375 Gene3D - 244 371 - -
Stsc334g00001 375 Pfam Subtilase family 95 200 IPR000209 GO:0006508|GO:0008236
Stsc334g00001 375 ProSitePatterns Serine proteases, subtilase family, serine active site. 154 164 IPR023828 -
Stsc334g00001 375 ProSiteProfiles Serine proteases, subtilase domain profile. 1 227 - -
Stsc334g00001 375 SUPERFAMILY Subtilisin-like 97 231 IPR036852 GO:0004252|GO:0006508
Stsc334g00001 375 Gene3D - 14 91 - -
Stsc334g00001 375 Pfam Fibronectin type-III domain 271 369 IPR041469 -
Stsc334g00001 375 CDD PA_subtilisin_like 14 84 - -
Stsc334g00001 375 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 369 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc334g00001 Stsc-Chr334 730 1915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc334g00001 48 367 Subtilisin-like Serine Gene Family AT2G05920 41.337 6.67e-76 247