Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33462g00001 ATGATGTCACTCTCTCTCTTACACTCCCCACATTCCCTAACCCTAAACCTACACCCCCATGCGCACTTTAGCCAACCCTCTGCCTATTCCATGTCCATCTTACGCCGCCTCACCCTAACCCTACGCCCTCGCCCCAACCACATCCGCCATCGCCGCATCGCCACCACATGCGCCGCTGTCCGCCAGGACACCACCCTCTGGACCCCAGCCCCGCTCTCTGAGGTCGAACCCGCCGCCGAGTCCCTCTTCCACATCTCCGTCGACATCTCCGCCGCGCCGGATCTAGTGACGTCACACACGCGCGCCGGCCAGTATCTCCAGCTCCGTGTTCCCGACGCGCCCAAGCCCGTGTTCCTTGCCATCGCATCACCGCCCAAGCTTGCATCTGACCGTGGCGCGTTTGAGTTCTTGGTGAAGAGCGTGAAGGGGTCCACCGCGGAGGCGCTGTGCGCGTCGAAGAGAGGGGATGTGGTGGAGCTCAGCCAGGTCATGGGAAACGGGTTCGATATCAGCCGGATCGACCCGCCCGAGAAATTCGGCACTGTCATCGTCTTTGCCACTGGTTCCGGAATTAGCCCGATTCGATCGCTTGTCGAGTCAGGATTTGGTGCTAGCCGGAGGTCTGATGTAAGGCTATATTATGGGGCAAGAAACCTTCAGAGAATGGCTTATCAGGATAGATTTAAGGAATGGGAATCTTCTGGCGTGAAGATTGTGCCTGTGTTATCTCAACCAGATGATAGTTGGAGTGGGGAAAGAGGCTTTGTACAGGAGGCATTTAAAAAAGCGAAGCAAATATCAAACCCTTTATCAACTGGTGCAGTACTTTGTGGCCAGAAAGAGATGGCTGAGGAAGTGACATCTATTCTAGTTGCGGATGGAGTCTCAGGTGAGAAGATATTGAAGAACTTTTGA 915 0.553 MMSLSLLHSPHSLTLNLHPHAHFSQPSAYSMSILRRLTLTLRPRPNHIRHRRIATTCAAVRQDTTLWTPAPLSEVEPAAESLFHISVDISAAPDLVTSHTRAGQYLQLRVPDAPKPVFLAIASPPKLASDRGAFEFLVKSVKGSTAEALCASKRGDVVELSQVMGNGFDISRIDPPEKFGTVIVFATGSGISPIRSLVESGFGASRRSDVRLYYGARNLQRMAYQDRFKEWESSGVKIVPVLSQPDDSWSGERGFVQEAFKKAKQISNPLSTGAVLCGQKEMAEEVTSILVADGVSGEKILKNF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33462g00001 304 PANTHER - 15 304 - -
Stsc33462g00001 304 Gene3D Translation factors 65 166 - -
Stsc33462g00001 304 Pfam Oxidoreductase NAD-binding domain 186 286 IPR001433 GO:0016491
Stsc33462g00001 304 Gene3D - 179 304 IPR039261 -
Stsc33462g00001 304 CDD FNR_like 73 301 - -
Stsc33462g00001 304 PRINTS Phenol hydroxylase reductase family signature 183 202 - -
Stsc33462g00001 304 PRINTS Phenol hydroxylase reductase family signature 208 217 - -
Stsc33462g00001 304 PRINTS Phenol hydroxylase reductase family signature 100 112 - -
Stsc33462g00001 304 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 65 170 IPR017927 GO:0016491
Stsc33462g00001 304 SUPERFAMILY Riboflavin synthase domain-like 62 168 IPR017938 -
Stsc33462g00001 304 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 175 300 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33462g00001 Stsc-Chr33462 1557 3836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33462g00001 103 298 NADPH P450 reductases AT5G17770 26.667 8.61e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33462g00001 - - lang:109346377 450.284