Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33213g00001 ACCCATTTGAATGTAGCCGATAACAGCGGAGCCCGCCAATTGATGTGTATTCGAATCATAGGAGCTGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTGCCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTATACGTACTCGTAAAGAACTTAAACGCAGCAATGGCATGATAATACAGTATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATCTTTGGTGCAATCGCCCAGGAATTGAGACAGTTAAATTTCACTAAAATAGTCTCATTAGCACCTGAG 345 0.4058 THLNVADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIIRTRKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIAQELRQLNFTKIVSLAPE 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33213g00001 115 Pfam Ribosomal protein L14p/L23e 1 115 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc33213g00001 115 NCBIfam 50S ribosomal protein L14 1 115 IPR005745 GO:0003735|GO:0006412|GO:0015934
Stsc33213g00001 115 Hamap 50S ribosomal protein L14 [rplN]. 2 114 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc33213g00001 115 ProSitePatterns Ribosomal protein L14 signature. 55 81 IPR019972 -
Stsc33213g00001 115 Gene3D Ribosomal protein L14 1 115 IPR036853 GO:0003735|GO:0005840|GO:0006412
Stsc33213g00001 115 SMART Ribosomal_L14_2 1 115 IPR000218 GO:0003735|GO:0005840|GO:0006412
Stsc33213g00001 115 FunFam 50S ribosomal protein L14, chloroplastic 1 115 - -
Stsc33213g00001 115 SUPERFAMILY Ribosomal protein L14 1 115 IPR036853 GO:0003735|GO:0005840|GO:0006412
Stsc33213g00001 115 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 115 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33213g00001 Stsc-Chr33213 2607 2953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33213g00001 3 113 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.522 1.52e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33213g00001 K02874 - csin:14412462 206.838