Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33153g00001 ATGCCAAATGGATCCTTGGATTCAATCTTGTTCCATGAGAAGGGCTCCATGTCCAAGGTGTTGGAATGGAAAGAAAGGTACCAAATTGCTCTTGGGACAGCTAGGGGACTGTCTTATCTCCATGAGAAGTGTAGAGACCGCATCATACACTGCGATGTGAAGCCAGAAAACATTCTTTTAGATGCTGATCTTTGTCCAAAAGTGGTACATTTTGGCCTTGCAAAGCTGGTTGGAAGGGACATTGGCCAGGTCCTCACAACCATGAGAGTAACAAGGGAATATCTTGCTCCGGAATGGAATTCAGGGGTGCCTATAACTGCCAAAGCCGATGTCTATAGCTACGGAATGATGCTGTTCGAGTTTGTTTCTGGTAGAAGGAACTCAGTTCCACCTGACGATGGACAAGTTAGGTTCTTCCCTACGTGGGCTGCAAACACAACGAGTGAAGACGGAAATGTGCTTAGCCTTTTGGATCCAAAGTTGAAGGGAAATGCTGACATCGAAGAGGTCATTCGAGTCATCAAAATAGCTTTCGAAACTGTTTTATAA 549 0.4499 MPNGSLDSILFHEKGSMSKVLEWKERYQIALGTARGLSYLHEKCRDRIIHCDVKPENILLDADLCPKVVHFGLAKLVGRDIGQVLTTMRVTREYLAPEWNSGVPITAKADVYSYGMMLFEFVSGRRNSVPPDDGQVRFFPTWAANTTSEDGNVLSLLDPKLKGNADIEEVIRVIKIAFETVL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33153g00001 182 PANTHER OS07G0415500 PROTEIN 1 178 - -
Stsc33153g00001 182 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 182 - -
Stsc33153g00001 182 Pfam Protein kinase domain 4 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc33153g00001 182 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Stsc33153g00001 182 Gene3D Transferase(Phosphotransferase) domain 1 1 181 - -
Stsc33153g00001 182 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc33153g00001 182 SUPERFAMILY Protein kinase-like (PK-like) 1 175 IPR011009 -
Stsc33153g00001 182 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33153g00001 Stsc-Chr33153 1575 2123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33153g00001 1 178 Receptor kinase-like Gene Family AT1G56120 45.506 1.49e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc33153g00001 Pkinase 1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33153g00001 - - ahf:112789715 283.108