Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc33151g00001 ATGGAACACCAAAGTGAAATTCAAGCAGCCAAACTTCTTAAAGCTCAAAGCCACATTTGGAATCACATATTCAATTTCATAAATTCCATGTCCCTTAAATGTGCTATTGACTTAAGCATACCTGAAGCCATTTATAAATATGGCCAACCCATGCCCCTCTCAAAGCTTATCATTTCATTGCAAATTCATCCATCAAAATCCTCCTTCGTTCAAAGATTGATGAAAATCTTAATCCATTCCGGCTTCTTCACTACCAAGAATGTAGCCAACAACAACGATGATGAGCTCGAAGAAGCCGGGTATGTTCTAACGGATTCATCTATGTTGCTACTTAAGGACAACCCCTTAAGTGTGACACCATTCTTGCTAGCCATGCTTGATCCGGTTTTCACAAAACCATGGCATCAAATGTCTATGTGGTTCAGAAATGATGATGCTACACCATTTCAAACTGAACATGGAATAACATTTTTTGAATATTTTGGCCGTGAGCCTAAGCTTAACAATCTTTACAATGATGCCATGGCAAGTGATGCTCGATTGGTTTGCAATTTATTACTTGATGACAAGTACAAGGGTGTGTTTGAGGGTTTGGAATCATTGATTGATGTTGGTGGAGGCACTGGAACTCTTGCAAAAGCCATTGCCAAATCGTTTCCCCAAATGGAGTGCATCGTATTTGATCAACCGCATGTTGTTTCTGGCTTCGAATTGGAAGGAACTGAGAACCTTAAATATGTTGGAGGAAACATGTTTGATGCCATTCCTCCTTCTAATGCCATTTTGTTGAAGTGGATTTTGCACGACTGGAATGATGAGGAATGTTTGAACATATTGAGGAATTGCAAAGAGTCAATCATGAATAATGGCGGCAAAGGAGGGAAGGTGATTATCATAGATATGGTGATGAAGGATGATGAGTCACTTCAAACACAACTCTTCTTTGACATGCTGATGATGGTGTTGGTCACAGGAAAGGAGAGGAATGAAAAAGAGTGGGCCAAATTAATATTTGCTGCTGGTTTTTGTGACTACAAGATAACTCCAATTCTAGGACCAAGGTCTCTCATTGAGATAATATATACATAG 1089 0.393 MEHQSEIQAAKLLKAQSHIWNHIFNFINSMSLKCAIDLSIPEAIYKYGQPMPLSKLIISLQIHPSKSSFVQRLMKILIHSGFFTTKNVANNNDDELEEAGYVLTDSSMLLLKDNPLSVTPFLLAMLDPVFTKPWHQMSMWFRNDDATPFQTEHGITFFEYFGREPKLNNLYNDAMASDARLVCNLLLDDKYKGVFEGLESLIDVGGGTGTLAKAIAKSFPQMECIVFDQPHVVSGFELEGTENLKYVGGNMFDAIPPSNAILLKWILHDWNDEECLNILRNCKESIMNNGGKGGKVIIIDMVMKDDESLQTQLFFDMLMMVLVTGKERNEKEWAKLIFAAGFCDYKITPILGPRSLIEIIYT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc33151g00001 362 Gene3D - 2 110 IPR036388 -
Stsc33151g00001 362 Pfam O-methyltransferase domain 134 342 IPR001077 GO:0008171
Stsc33151g00001 362 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Stsc33151g00001 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Stsc33151g00001 362 PANTHER O-METHYLTRANSFERASE 12 346 IPR016461 GO:0008168
Stsc33151g00001 362 FunFam Coniferyl alcohol 9-O-methyltransferase 2 110 - -
Stsc33151g00001 362 SUPERFAMILY "Winged helix" DNA-binding domain 11 115 IPR036390 -
Stsc33151g00001 362 Gene3D Vaccinia Virus protein VP39 111 360 IPR029063 -
Stsc33151g00001 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Stsc33151g00001 362 FunFam O-methyltransferase ZRP4 112 361 - -
Stsc33151g00001 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc33151g00001 Stsc-Chr33151 1261 2618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc33151g00001 30 360 Monolignol Biosynthesis Gene Families AT5G54160 32.840 8.33e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc33151g00001 - K16040 aip:107609507 623.624