Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32g00035 ATGACCAACGGCCACATAACCGTAACCGTCGACGGCACGCATTCTGACGCCAACGAACACCGCCGCACTCCTCCTCCTCCTTCCGCTTCTGTGAATCTCGATTATGACGACGACGACGATGAAGATGACGACGTTGCAGATCCAAATGATCCTTTCGATATTCAACACACCAAGCATGCGCCCATCGAGACCCTCCGCCGTTGGAGACAAGCAGCACTGGTGCTCAATGCGTCAAGGCGCTTTAGATATACCTTGGACCTGAAAAAGGAAGAGGAGAGACAGCAAAAGAAAAGCCTCATTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTCTTCAGATTGGCCGGTGAACGTGAACTGGTGGTAACAGCACCGACACCTGCACACCCAGTTGGTGACTTTGGAATTGGGCTTGAACAACTTACTTCAGTTTCTAAGGAACAGAACACTTCTGCTTTAGAAGAATATGGAGGGGTCAAGGGCTTGTCAAATTTAATAAGGTCAAATGTCGATAAAGGAATTAGTGGAGATGTTGCTGATTTACAAAGAAGGAAAAATGCATATGGAACCAACACATATCCCCGGAAAAAAGGAAGAAGCTTCTGGATGTTTTTATGGGAAGCATGGCAAGATCTAACTCTTATAATATTGATTATAGCAGCAGCTGTGTCATTGGTACTTGGAATAAAAACAGAGGGTGTGACTGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTCTTCTGGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTAAGAATTTGAATGCAGAGAAACAAAATATACAATTGGAGGTCATCAGAGGTGGTAGAACAGTTAAATTGTCGATATTTGACATTGTTGTTGGTGATGTAGTACCTCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGTCATTCACTTGCCGTTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAAAACACCCTTTTTGATGTCTGGTTGCAAAGTAGCTGATGGAGTTGGAGTTATGCTGGTAACTGGTGTTGGTATAAATACGGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATAATGGAGAAGAGACTCCATTGCAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGAGTAGTTGGGCTTTCTGTAGCTGTTTTAGTGCTAGCAGTCCTCTTGGGCAGATACTTTTCTGGCCATTCTACTGATGATGAAGGAAAAGTGGAATTTATTGCCGGAAAGACTAAAGCAAGTACTGCAGTTGATAGCGTCATCAAGATTTTCACCATCGCACCTGGCTTACTCAATGCGGAAAATGATGAAGGACAAAGCCCTGGTTCGGAGGCTGTCGGCATGCGAAACTATGGGCTCTGCGACAACAATATGCAGTGA 1449 0.4431 MTNGHITVTVDGTHSDANEHRRTPPPPSASVNLDYDDDDDEDDDVADPNDPFDIQHTKHAPIETLRRWRQAALVLNASRRFRYTLDLKKEEERQQKKSLIRAHAQVIRAALLFRLAGERELVVTAPTPAHPVGDFGIGLEQLTSVSKEQNTSALEEYGGVKGLSNLIRSNVDKGISGDVADLQRRKNAYGTNTYPRKKGRSFWMFLWEAWQDLTLIILIIAAAVSLVLGIKTEGVTEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFKNLNAEKQNIQLEVIRGGRTVKLSIFDIVVGDVVPLKIGDQVPADGVLITGHSLAVDESSMTGESKIVHKDHKTPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRYFSGHSTDDEGKVEFIAGKTKASTAVDSVIKIFTIAPGLLNAENDEGQSPGSEAVGMRNYGLCDNNMQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32g00035 482 Gene3D - 61 114 - -
Stsc32g00035 482 SUPERFAMILY Calcium ATPase, transmembrane domain M 157 422 IPR023298 -
Stsc32g00035 482 FunFam Calcium-transporting ATPase 256 376 - -
Stsc32g00035 482 SUPERFAMILY Calcium ATPase, transduction domain A 278 373 IPR008250 -
Stsc32g00035 482 PANTHER CATION TRANSPORTING ATPASE 98 449 - -
Stsc32g00035 482 FunFam Calcium-transporting ATPase 208 265 - -
Stsc32g00035 482 SMART Cation_ATPase_N_a_2 159 230 IPR004014 -
Stsc32g00035 482 FunFam Calcium-transporting ATPase 60 116 - -
Stsc32g00035 482 Pfam Ca2+-ATPase N terminal autoinhibitory domain 49 92 IPR024750 GO:0005516
Stsc32g00035 482 MobiDBLite consensus disorder prediction 33 48 - -
Stsc32g00035 482 MobiDBLite consensus disorder prediction 1 58 - -
Stsc32g00035 482 Gene3D - 208 415 - -
Stsc32g00035 482 Pfam E1-E2 ATPase 277 413 - -
Stsc32g00035 482 Gene3D - 181 376 - -
Stsc32g00035 482 Pfam Cation transporter/ATPase, N-terminus 158 225 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32g00035 Stsc-Chr32 162693 167146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32g00035 2 447 Primary Pumps ATPases AT3G21180 67.040 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32g00035 K01537 - gmx:100777143 672.93