Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32g00003 ATGACGGATTCAAAGAAGTCATCTAACAAGATCAGGGACATTGTTCGGCTTCAACAGATCCTCAAGAAGTGGAAGAATAAGGCTGCAAATCATAATCATAATCATAATAATAATACTTGTGGGGACACTTCTGGATCTGGCTTTGGCAGTAGTAAAGGCATCAAGTTCCTGAAAAGGACTCTGTCATTGAGCGACTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTCGGGTGAGATGGCTGTCCCAAAAGGGTGTCTTGCTGTTAGTGTTGGTGTTGGGAGTGAGGTGAAGAGATTCGTGATCCCAACAGAGTACTTGAGACACGAAGCATTCGATATGTTGCTGCGTCAAGCCGAAGAAGAGTTCGGTTTCCAGCAGGAGGGGGTCCTCAGAATCCCATGCCAACTCTCCCTCTTCCACAGCATACTCAACCTCCTCCAATGTAATAACAATGACAAACAACTCTATTCAAACTTGCAACAACAACAAGAAGAAGCAAAACAAGTCATCATTGCTCCATATGCATCGTCGGATTGCCAAGTAACTAATACTACTTCCACTCATACCGATCACATGTATTGCCAATGA 594 0.4327 MTDSKKSSNKIRDIVRLQQILKKWKNKAANHNHNHNNNTCGDTSGSGFGSSKGIKFLKRTLSLSDLSSSSSSSSSSCSGEMAVPKGCLAVSVGVGSEVKRFVIPTEYLRHEAFDMLLRQAEEEFGFQQEGVLRIPCQLSLFHSILNLLQCNNNDKQLYSNLQQQQEEAKQVIIAPYASSDCQVTNTTSTHTDHMYCQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32g00003 197 Coils Coil 151 171 - -
Stsc32g00003 197 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 70 144 IPR003676 GO:0009733
Stsc32g00003 197 Coils Coil 14 34 - -
Stsc32g00003 197 Pfam Auxin responsive protein 69 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32g00003 Stsc-Chr32 5577 6170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32g00003 6 166 Calmodulin-binding Proteins AT2G24400 52.795 1.71e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32g00003 K14488 - gmx:100782489 130.954