Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32g00002 ATGAAACTTGCAATCATCATGAGGTTGGCACTGGGAAGCCCTCGCAGTGGCAGCAATGCATGCCCTATGGACGGAAAGATGCCATTACTGGCGTCGGATGGAAGCAAGGTTCTGAAGGGATACGTTGCGGTGTATGTGGGGCCTCATATGAGAAGGTTTGTGATTCCCATCAGCTTCCTGGGGATGCCAGAGTTCAGGGTGTTGCTGGAGAGGGTGGAGGAGGAGTTTGGGTGCGACCATCATGGAGCAGGAGCTCTTGAAATTCCCTGCGACGACGAAGACCATTTTGAGGAAATATTGGCGACGTGTTTTGCAAGGCACCGGATGGCGTCTTCTTCTAATAACTCCAACAAGTTACTCGCTATGCTCTCTTCTTGA 378 0.5132 MKLAIIMRLALGSPRSGSNACPMDGKMPLLASDGSKVLKGYVAVYVGPHMRRFVIPISFLGMPEFRVLLERVEEEFGCDHHGAGALEIPCDDEDHFEEILATCFARHRMASSSNNSNKLLAMLSS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32g00002 125 Pfam Auxin responsive protein 31 101 IPR003676 GO:0009733
Stsc32g00002 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32g00002 Stsc-Chr32 3948 4325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32g00002 37 113 Calmodulin-binding Proteins AT3G43120 50.649 4.98e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32g00002 K14488 - mtr:25491161 94.3597