Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32829g00002 ATGGCCTTACAGAACATTGGTGCTGCAAACAGTGATGATGCCTTCTATAGGTATAAGATGCCCAAAATGATTACCAAAATTGAGGGTAGAGGGAATGGCATCAAGACAAATATTGTCAATATGGTTGATATTGCCAAGGCATTGGCGAGGCCAGCCTCTTACACAACCAAATACTTTGGGTGTGAGCTTGGAGCCCAGTCAAAGTTTGACGAGAAATCTGGTACTTCTCATGTGAATGGGGCGCACGACACTGCAAAACTTGCTGGCCTTCTTGAGAACTTCATCAAGAAATTTGTTCAATGTTATGGATGTGGAAACCCGGAAACAGAGATATTGATTACCAAGAACCAGATGATCCAGCTGAAATGTGCTGCCTGTGGTTTTGTGTCGGATGTGGATATGAGGGACAAGCTGACTACATTTATTCTGAAAA 433 0.4296 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKSGTSHVNGAHDTAKLAGLLENFIKKFVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFILK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32829g00002 144 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Stsc32829g00002 144 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Stsc32829g00002 144 Gene3D - 105 144 - -
Stsc32829g00002 144 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Stsc32829g00002 144 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 144 IPR045196 GO:0003743|GO:0006413
Stsc32829g00002 144 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Stsc32829g00002 144 Gene3D - 2 104 - -
Stsc32829g00002 144 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Stsc32829g00002 144 FunFam Eukaryotic translation initiation factor 5 105 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32829g00002 Stsc-Chr32829 5422 6789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32829g00002 1 144 Eukaryotic Initiation Factors Gene Family AT1G36730 88.889 1.74e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32829g00002 K03262 - gmx:100796346 288.5