Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc326g00006 ATGGGCCAGTGCTACGGCAAGCCCAATTCCACCGCCGATAACCACCATGAGCTCGGAACATCCGCCACAAATGAACCTTCCGGTGAAGCATTTCGCTCGCCGCTCCCCTCTTCTGCCGCCGCCGCCAATGGATTCCCGTCGGTGAAGAACACGCCAGCGCGCCCGTCCTCGCATGCGAGCCCATGGCCAAGCCCGTACCCTCACGGCGTGAACGCCAGCCCGTTGCCAGGGGATGGGGTGTCACCGTCGCCGGCCAGGGGGACGACGCCGAGGAGGTTCTTCAGAAGGCCGTTTCCTCCTCCGTCTCCTGCGAAGCACATAAGGGCGTCGCTGGCGAAGAGGCTGGGTCAGGGTCGACCGAAGGAAGGGCCGATACCAGAAGATCGAGGGGCGGAGGCGGAGCAGTCTCTGGACAAGAGCTTCGGTTATGGGAAGAACTTTGGAGCTAAGTATGAGCTGGGAAAGGAAGTGGGGCGAGGGCATTTTGGTCATACCTGCTCCGCCAGGGTGAAGAAGGGCGAGCTCAAAGACCAGTTTGTTGCTGTCAAAATCATTTCCAAGGCTAAGATGACCACGGCAATAGCAATTGAAGACGTTCGTAGAGAGGTGAAGCTATTAAAAGCTCTATCTGGCCATCAGCATCTTGTCAAATTTTATGATGCTTACGAGGATGCCAACAACGTGTACATAGTTATGGAGAGTGAAGATGCTGATATGAAGCTTATAGATTTTGGTCTATCTGATTTCATCAGGCCAGATGAACGGTTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTAGAAGCAGATATATGGAGTATTGGTGTTATCACCTACATCTTACTTTGTGGAAGTCGGCCTTTCTGGGCTCGAACAGAATCTGGAATTTTTCGCGCAGTGCTCAGAGCTGATCCTAACTTCGATGATCTACCCTGGCCAACTGTGTCTTCAGAGGCTAAGGATTTTGTCAAAAGGCTCTTAAACAAGGACTACAGGAAAAGAATGACCGCCGTCCAGGCTCTAACTCACCCTTGGTTAAGGGATGACAGTCGTTCTATTCCATTAGATATATTAATTTATAAATTAGTGAAGTCATATCTTCATGCGACACCATTCAAGCGTGCAGCAGTGAAGGCCCTTTCAAAAGCATTGACAGAGGATGAATTAGTTTATCTTAGAGCACAATTCAGATTGTTGGAACCAAATAGAGATGGGCATGTCTCCCTTGATAATTTCAAAATGGCTCTTGCACGTCATGCCACTGATGCCATGAGGGAGTCAAGGGTTCTCGATATCATACATGCGATGGAACCACTTGCCTATAGGAAGATGGATTTTGAAGAATTCTGTGCCGCTGCTATTAGCACTTATCAACTGGAGGCACTTGATAGGTGGGAAGATATTGCCAACACTGCTTTTGAGCATTTTGAGAGAGAAGGCAACCGTGTGATATCAGTTGAAGAGTTAGCAAGAGAGTTGAATCTTGGCCCTTCAGCTTATACGATTCTCAAAGATTGGATACGAAATACTGATGGGAAGCTTAGCTTACTTGGATATACAAAATTCTTACATGGCGTGACTCTCCGGTCAAACCCAAGACACCGTTGA 1638 0.4878 MGQCYGKPNSTADNHHELGTSATNEPSGEAFRSPLPSSAAAANGFPSVKNTPARPSSHASPWPSPYPHGVNASPLPGDGVSPSPARGTTPRRFFRRPFPPPSPAKHIRASLAKRLGQGRPKEGPIPEDRGAEAEQSLDKSFGYGKNFGAKYELGKEVGRGHFGHTCSARVKKGELKDQFVAVKIISKAKMTTAIAIEDVRREVKLLKALSGHQHLVKFYDAYEDANNVYIVMESEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSSEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSRSIPLDILIYKLVKSYLHATPFKRAAVKALSKALTEDELVYLRAQFRLLEPNRDGHVSLDNFKMALARHATDAMRESRVLDIIHAMEPLAYRKMDFEEFCAAAISTYQLEALDRWEDIANTAFEHFEREGNRVISVEELARELNLGPSAYTILKDWIRNTDGKLSLLGYTKFLHGVTLRSNPRHR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc326g00006 545 MobiDBLite consensus disorder prediction 1 133 - -
Stsc326g00006 545 Gene3D Transferase(Phosphotransferase) domain 1 229 363 - -
Stsc326g00006 545 SUPERFAMILY EF-hand 382 535 IPR011992 -
Stsc326g00006 545 FunFam - 227 372 - -
Stsc326g00006 545 SUPERFAMILY Protein kinase-like (PK-like) 150 377 IPR011009 -
Stsc326g00006 545 Gene3D - 364 536 - -
Stsc326g00006 545 MobiDBLite consensus disorder prediction 43 57 - -
Stsc326g00006 545 ProSiteProfiles Protein kinase domain profile. 151 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc326g00006 545 FunFam CDPK-related kinase 1 392 464 - -
Stsc326g00006 545 Gene3D Phosphorylase Kinase; domain 1 144 228 - -
Stsc326g00006 545 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Stsc326g00006 545 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Stsc326g00006 545 PANTHER SERINE/THREONINE-PROTEIN KINASE 135 233 - -
Stsc326g00006 545 Pfam Protein kinase domain 151 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc326g00006 545 Pfam Protein kinase domain 235 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc326g00006 545 FunFam CDPK-related kinase 1 144 237 - -
Stsc326g00006 545 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc326g00006 Stsc-Chr326 32927 37520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc326g00006 1 544 EF-hand Containing Proteins AT3G50530 50.926 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc326g00006 Pkinase 2.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc326g00006 K13412 - cave:132186533 857.055