Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32661g00001 ATGTCTGAATTCGACACTAACATCCCGACTACTTTTGATCCCTTTGCTGAGGCAAATGCTGACGACTCAGGTGCTGGGGCCAAAGAGTACGTTCATGTGCGTATACAACAACGTAACGGAAGGAAAAGCCTGACAACTGTTCAAGGATTAAAGAAAGAGTTCAGCTATACCAAGATACTCAAAGACCTGAAGAAGGAATTCTGCTGTAATGGTACTGTTGTCCAGGACCCTGAGTTAGGCCAGGTCATACAGCTTCAGGGAGATCAAAGAAAAAACGTTTCTACTTTCCTTGTGCAGGCGGGCATAGTAAAGAAGGAGCATATCAAGATTCATGGTTTCTAA 342 0.4386 MSEFDTNIPTTFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYTKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32661g00001 113 NCBIfam translation initiation factor SUI1 7 113 IPR005874 GO:0003743
Stsc32661g00001 113 SUPERFAMILY eIF1-like 7 113 IPR036877 GO:0003743|GO:0006413
Stsc32661g00001 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Stsc32661g00001 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Stsc32661g00001 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Stsc32661g00001 113 Gene3D - 2 113 - -
Stsc32661g00001 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Stsc32661g00001 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Stsc32661g00001 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32661g00001 Stsc-Chr32661 1380 4185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32661g00001 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 86.726 1.16e-73 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32661g00001 K03113 - gmx:100784390 221.476