Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32573g00001 ATGGGACTTCCATTCATTGGAGAGACCCTTCAATTGATGATTCCTAGTTACTCACCGGATCTCCACCCCTTCATCAAAAAGAGAGTCGAGAGGTATGGCCCTATATTTCGAACAAGTCTATTTGGTGAACAAGTTGTAGTAACAACTGATGAAGAATTCAACAAGTACTTGGTTAAGGAAGAAGGTAAATCTGTTGAGATATGGTCAGGTCCCTTATCAGAAGTTTTTCTGCCAGGTGAAGAAGGTGCTCAGTTGCTACAACCAGATCTCATCAAGTATTTTAGAAACGTCGCTCTAAGTCACATAGGTCCTGACTCCATTAGAGAGAAACTACTTCCTCAAATGGAACAAATCTGTTCACAGACTTGCCACAAATGGTCAACTCAAACATCGGTTGAAGTTGTACACTCTGTTGCCACTATGGTACTTGAGTTATTTGGAAAGTATTATTTTGGGTATGATCCTGAGAAGTTAAGTGAGAACGAGAGGACATCAAAATACTTCGCCACTTTTTTAAGTGATGGTCTTATGACAATTCCCTTAGATATTCCTGGCACCACATACAACACATGCAAGAAGGACTTAAAGAAAGTATACAAATTTCTGAAGAATGTTATGGAGGAGAGGCGCAAATCACCAGAAAAATATGGAGGAGATTTTATTGACCAGTTAAACAAAGAAATGAGACCTCAGGCTAATTTGAGTGAAGATCAAGTTATTTACATTATGATTGGAGTCTGGATCGCTACTTTTCTCACCAACTCAATTGTCTTGGCATTAATCTTCAAATTCTTGGCGGATCATCCTTCTGTCCTTGAAGAACTAAGAGTGGAACACGAGGGTATTCTTAAGAACCGAGATGGATCATCAAGCTCTAATTTAACATGGCATGAATACAGATCCATGGAATTTACCCAACACGTAATCAACGAGACTCTAAGATTCTCACCTTCATTCCCTGGATTATTAAGAAAAGCTTTGAAAGATATCCCCATAAACGGATATACTATTCCTGCTGGTTGCGGCATGGTGATTGTGACTCCCATACTTCATATGAATCCAAAAGTTTATAAGGATCCACTTACCTTCAATCCATGGCGTTGGAAAGACCTTGATTCCTTTACTGTGTCAAAATATTTCAAGCCTTTTGGTGGAGGAATGAGACAATGCCCCGGGGCTGATATTAGTAGAGCTTTCTTGTCGACTTTCATTCATGTTTTGGTCACAAAATATAGGTGGACAAAAGTCAAGGGAGGGACACTTGTTCGGAATCCCATGTTAGGGCTTCGTGATGGAGTTCATATCAAAATTTGGGAGAAGCCAGAAACTAATAATAATGATAACTAA 1347 0.3935 MGLPFIGETLQLMIPSYSPDLHPFIKKRVERYGPIFRTSLFGEQVVVTTDEEFNKYLVKEEGKSVEIWSGPLSEVFLPGEEGAQLLQPDLIKYFRNVALSHIGPDSIREKLLPQMEQICSQTCHKWSTQTSVEVVHSVATMVLELFGKYYFGYDPEKLSENERTSKYFATFLSDGLMTIPLDIPGTTYNTCKKDLKKVYKFLKNVMEERRKSPEKYGGDFIDQLNKEMRPQANLSEDQVIYIMIGVWIATFLTNSIVLALIFKFLADHPSVLEELRVEHEGILKNRDGSSSSNLTWHEYRSMEFTQHVINETLRFSPSFPGLLRKALKDIPINGYTIPAGCGMVIVTPILHMNPKVYKDPLTFNPWRWKDLDSFTVSKYFKPFGGGMRQCPGADISRAFLSTFIHVLVTKYRWTKVKGGTLVRNPMLGLRDGVHIKIWEKPETNNNDN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32573g00001 448 PRINTS P450 superfamily signature 381 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS P450 superfamily signature 267 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PANTHER CYTOCHROME P450 26 1 417 - -
Stsc32573g00001 448 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 383 392 IPR017972 GO:0005506|GO:0016705
Stsc32573g00001 448 Gene3D Cytochrome P450 1 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 Pfam Cytochrome P450 3 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 SUPERFAMILY Cytochrome P450 2 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS E-class P450 group I signature 346 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS E-class P450 group I signature 390 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS E-class P450 group I signature 306 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS E-class P450 group I signature 380 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc32573g00001 448 PRINTS E-class P450 group I signature 258 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32573g00001 Stsc-Chr32573 777 5130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32573g00001 1 440 Cytochrome P450 AT1G12740 40.492 5.56e-120 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32573g00001 - - aip:107619015 547.354