Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32541g00001 ATGTCCGACGACAAAGGCAGAGAGCAATACGGCGTTCTCCTCTACTACAAGTACGCCCACATCCCCAACCTCCAAGACCTCCTCTCCTTCTACCAATCCAACTGCTCCCAGCTCTCCCTCCTCGGCCGAGTTCGCCTCTCTTCCCGCGGCGTCAATGTTACTGTTGGTGGCAAGTTGTCTTCCTTGGAGAGCCACATTGAATCCCTCAAGGCCAAAGACTCTGTCTTCGAAGACACCGATTTCAAGCTTGCTACTTCTCACGAGCCCCTAAACGATAGGGTCGCCAAGGAGTGTGGATTCACTTCTCTCTCCATTCGAATCGTCGAGGAACTTGTTACTCTCAGTTCTCATCCCCTGTTAAAGTCACCAGAAATTTCAAATGCTGGAAGACATCTTTCTGCTTCTGAGTTTCACTCTTCCCTTCAAAATTCTGCTCAGAAAACTCCAAGAGATGGCCTTTTGTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTCCATGCACCAAATATTGAAACTCTGGATCCACAAGTTAGGCAGTATAGTGATTTGTCCTCATGGATAGATGAAAATAGTGAGAAGCTGAAAGGAAAACATGTCCTTATGTATTGTACTGGAGGAATAAGGTGCGAAATGGCATCTGCATATATTAAGTCAAAAGGTGCTGGCTTTGAGAATGTGTTTCAGTTGTTTGGCGGTATCCAACGGTATTTGGAGCAATTCCCAGATGGTGGCTTTTTCAAGGGAAAGAATTTTGTATTTGATCACCGGATTTCTGTTGGAAGTTCAGATACTGATGTTCTTGGTACCTGCCTTATTTGTCATTGTTCATTTGATGATTATTCTTCACGCTGCAGATGTACTTATTGTAGAATGCTTGTCTTGGTGTGTCATAATTGTCAGAATGAAGCTGCATCGTATGTTTGTGAGCTGTGCCAGAAACAGGGCAAAGCTATTAGTTCAATGCAGTTAATTGATAATGGTGAATTGAAAACCCCATTGGAAGGTGCTGACTTGCAAAATTCATCTTCACATGCTACAGTATCACCTCAAATGCCTAAGGGAGATGATGTCAGGCCCTCTAAAAAGCTTAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCTTCCAGTTTTAAGGGAAGAACATCATCATTAGCGAAAAAACTAAAGAAAATTGCCGAATTTGTTTTCGTGGATGCACCTCATGAGCTGTCATTCATTTATCAAACAACTTCGGCCGAAGATGTGGCTTGTGAATCATCCCCGTTGCCCCCTAGTCCACCTCCACCTTCGGAGAATTGCAGGAAGAAATATGCTTGGGTAGTAGCTCCCAATTTTGATGGAAGTAATGATATTAGTTGGAAGGTAGCAGAAGGCCCATTTGACCCACTTCAATACCAGCAACAAACGGATGGATATGATACTTCCCTGTCACACTTGAAGAACGTTTTTTCCCAACAAGGGCCATTTGACGGCATCTTGGGGTTTTCACAGGGAGCGGCGATGGCAGCTTTGATCTCTGCCCAACAAGAACAACTAAAAGGTGAAATGGACTTCAAATTTGTAATAATATGCTCAGGCTTTGCTCTCAATGTAAAGGAGATGGAACGCGGCGTCATCAAGTGCCCTTCACTTCATATTTTTGGAAACGAACATGGTAAGGACAGGCAGATAGCCAACCAAGCAAGCAAGGAACTTGCTTCGCTGTATAATGAAGGTTGTTCTGTTATAATTGAACATGATTGTGGTCACATAATTCCTACTCGATCGCCATATATCGATGAGATAAAGGGTTTCCTTGGTCGTTTTCTGTAA 1827 0.434 MSDDKGREQYGVLLYYKYAHIPNLQDLLSFYQSNCSQLSLLGRVRLSSRGVNVTVGGKLSSLESHIESLKAKDSVFEDTDFKLATSHEPLNDRVAKECGFTSLSIRIVEELVTLSSHPLLKSPEISNAGRHLSASEFHSSLQNSAQKTPRDGLLLLDARNLYETRIGKFHAPNIETLDPQVRQYSDLSSWIDENSEKLKGKHVLMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDTDVLGTCLICHCSFDDYSSRCRCTYCRMLVLVCHNCQNEAASYVCELCQKQGKAISSMQLIDNGELKTPLEGADLQNSSSHATVSPQMPKGDDVRPSKKLRILCLHGFRQNASSFKGRTSSLAKKLKKIAEFVFVDAPHELSFIYQTTSAEDVACESSPLPPSPPPPSENCRKKYAWVVAPNFDGSNDISWKVAEGPFDPLQYQQQTDGYDTSLSHLKNVFSQQGPFDGILGFSQGAAMAALISAQQEQLKGEMDFKFVIICSGFALNVKEMERGVIKCPSLHIFGNEHGKDRQIANQASKELASLYNEGCSVIIEHDCGHIIPTRSPYIDEIKGFLGRFL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32541g00001 608 FunFam Rhodanese-like domain-containing protein 6 1 112 - -
Stsc32541g00001 608 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
Stsc32541g00001 608 SMART rhod_4 139 246 IPR001763 -
Stsc32541g00001 608 Pfam Serine hydrolase (FSH1) 365 599 IPR005645 -
Stsc32541g00001 608 MobiDBLite consensus disorder prediction 342 362 - -
Stsc32541g00001 608 Gene3D - 121 275 IPR036873 -
Stsc32541g00001 608 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 263 IPR036873 -
Stsc32541g00001 608 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 607 IPR020936 -
Stsc32541g00001 608 Gene3D - 2 112 - -
Stsc32541g00001 608 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Stsc32541g00001 608 FunFam esterase OVCA2 isoform X6 363 608 - -
Stsc32541g00001 608 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Stsc32541g00001 608 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Stsc32541g00001 608 Gene3D alpha/beta hydrolase 363 608 IPR029058 -
Stsc32541g00001 608 SUPERFAMILY alpha/beta-Hydrolases 366 608 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32541g00001 Stsc-Chr32541 587 5371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32541g00001 8 608 Sulfurtransferasese or Rhodanese AT1G09280 63.516 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32541g00001 - - gmx:100786152 990.719