Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32523g00001 ATGAACGTGGATCTGGAGTCGCTGGCGGAGGCCACTTCCGGCGCCATTGGATCACTCTTAAGCACCACCATCCTCTACCCTCTCGACACCTGCAAGACAAAGTACCAAGCTGAGGCTCGCTCCCATGGCCGCCAAAGATACAAGCATCTCTCAGATGTGTTATTTGAGGCAATAGCAAACCGCCAGGTGTTTTCGCTTTACCAGGGCCTTGGAACGAAAAATCTCCAGTCCTTCATTTCACAGTTTGTCTACTTCTATGGCTATAGCTATTTTAAAAGACTGTATCTGGAAAAGAGCGGAAACAAGTCTATTGGAACAAAAGCCAACTTGCTAATTGCTGCTGCTGCTGGGGCCTGCACAGCTGTTGCGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACCAGTGACTTTGGAAAGTCGAAAGGACTATTGCACACCCTTACAGAAGGCACCTGGAGTGATGCTTTCGATGGCCTAAGCATTTCCTTGTTATTGACCTCTAATCCTGCAATTCAGTATACAGTGTTTGACCAGCTGAAACAACGAGCTCTGAAGAATAAACAAAACAACGATGATAAAGCATCCCTTTCTGCATTTATGGCCTTCTTTTTGGGCGCAGTTTCCAAGAGTGTGGCTACCTGTTTAACTTATCCGGCCATCAGGTGCAAGGTCATCATTCAATCTGCAGACTCAGAGGAAGCAAACTCCAAAAAAGAGATTAAGAAACAAGATAAAACAATCTCTGGAGTACTCTATGGAATCTGGAAAGCAGAGGGCATATTGGGATATTTCAAAGGATTGAAGGCTCAGATCTTGAAAACTGTTTTGAGCTCAGCACTCCTCTTAATGATCAAGGAAAAGATTTCGGCCACCACTTGGGTTCTTATACTCTCAATTAGAAGGTTTCTATTACTCCCTAGGCCTAGGGTAAAAAACCTGTAA 948 0.4515 MNVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARSHGRQRYKHLSDVLFEAIANRQVFSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGNKSIGTKANLLIAAAAGACTAVATQPLDTASSRMQTSDFGKSKGLLHTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQNNDDKASLSAFMAFFLGAVSKSVATCLTYPAIRCKVIIQSADSEEANSKKEIKKQDKTISGVLYGIWKAEGILGYFKGLKAQILKTVLSSALLLMIKEKISATTWVLILSIRRFLLLPRPRVKNL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32523g00001 315 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Stsc32523g00001 315 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Stsc32523g00001 315 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Stsc32523g00001 315 SUPERFAMILY Mitochondrial carrier 7 289 IPR023395 -
Stsc32523g00001 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 198 293 IPR018108 -
Stsc32523g00001 315 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 314 IPR045900 GO:0005347|GO:0006635|GO:0015217
Stsc32523g00001 315 FunFam Peroxisomal adenine nucleotide carrier 1 3 294 - -
Stsc32523g00001 315 Gene3D Mitochondrial carrier domain 2 294 IPR023395 -
Stsc32523g00001 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Stsc32523g00001 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Stsc32523g00001 315 Pfam Mitochondrial carrier protein 198 291 IPR018108 -
Stsc32523g00001 315 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Stsc32523g00001 315 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32523g00001 Stsc-Chr32523 4406 7455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32523g00001 23 308 Chloroplast and Mitochondria Gene Families AT1G25380 26.403 2.95e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32523g00001 - - gmx:100787682 517.694