Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32521g00001 GAGGAGCAACTGCTGCTGTACGCACAGATGGCTAATCTAGTAAACGTGATACTACAGTGGCCTGAAATCAATATAAAAGAGATTGCAGAAAATTTCTCTAAGTTTGCATGCAATGCACATACCATTTGTGACAGCGAGTTGAGACCATTGGGAACAGGATTGTATACCGTTATTTCCATTATCAATCACAGCTGCTCGCCCAATTCCGTGTTGGTTTTCGAGGAAAAGACAGCGTCAGTACGTGCTGTGCAACATGTTCCCAAAGGTAGTGAGGTACTAATAAGTTACATAGAGACTGCTGGAAGCACTATGACTCGACAGAAAGCTCTCAAACAGCAGTACCTATTCAATTGTACATGTCCTCGCTGTTCTAAACTGGGCCAGTATGATGATATCCGAGAAAGTGCAATTCTAGAAGGATACAGATGTAAAAATGAAAAATGTGACGGTTTCTTGCTTCGTACTACTGATGGAAATGGATTCCAATGCCAAAAATGTGGACTGGTTAGGGAAAAGGAAGAGATAAAGAAAATTGCAACCGAGATAAAATCGCTATCCGAAGAAGAAGCTTCTAAGCTTTCATCTGCTGTCCATTATCAAGAAGCTATTTCCATATATAAAACGATTGAGAAACTGCAAACAAGACTCTATCATCCTTTCTCCATCAACTTGATGCGAATTCGAGAGAAGATTTTGAAGTTATTGATGGAGCTGGAAGAATGGAGTGAGGCTTTAGTATACTGCAAATTGACCATACCAGTCTATGAAAGTGCATATCCAGCTATTCATCCTCTGCTCGGTTTGCAGTACTATACATGTGGAAAACTTGAATGGTATCTGGGAGAAACAGAGGAAGCTGTGAAATCACTGACCAAGGCAGTGGATATACTAAAAATTACTCATGGGACAAATACACATTTTGTGAAGGAACTTTTGATGAAGTTGGACGAAGCCCGTGCGGAAGCATCTTACAAATCTTCCACTAAAGAGTAG 993 0.4048 EEQLLLYAQMANLVNVILQWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYTVISIINHSCSPNSVLVFEEKTASVRAVQHVPKGSEVLISYIETAGSTMTRQKALKQQYLFNCTCPRCSKLGQYDDIRESAILEGYRCKNEKCDGFLLRTTDGNGFQCQKCGLVREKEEIKKIATEIKSLSEEEASKLSSAVHYQEAISIYKTIEKLQTRLYHPFSINLMRIREKILKLLMELEEWSEALVYCKLTIPVYESAYPAIHPLLGLQYYTCGKLEWYLGETEEAVKSLTKAVDILKITHGTNTHFVKELLMKLDEARAEASYKSSTKE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32521g00001 330 SUPERFAMILY TPR-like 198 296 IPR011990 GO:0005515
Stsc32521g00001 330 Coils Coil 168 188 - -
Stsc32521g00001 330 Pfam SET domain 37 96 IPR001214 GO:0005515
Stsc32521g00001 330 Coils Coil 224 244 - -
Stsc32521g00001 330 Gene3D SET domain 13 96 IPR046341 -
Stsc32521g00001 330 ProSiteProfiles SET domain profile. 1 97 IPR001214 GO:0005515
Stsc32521g00001 330 Gene3D Tetratricopeptide repeat domain 101 330 IPR011990 GO:0005515
Stsc32521g00001 330 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 5 315 - -
Stsc32521g00001 330 SUPERFAMILY SET domain 35 124 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32521g00001 Stsc-Chr32521 1 2752 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc32521g00001 SET 8.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32521g00001 K11426 - lja:Lj1g3v0764540.1 541.191