Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32476g00002 ATGGGAAGGGCACCTTGCTGTGATAAAGCGAACGTGAAGAAAGGACCATGGTCGCCGGAAGAAGACGCCAAGCTCAAGTCTTACATAGAGCAAAACGGTACCGGCGGTAACTGGATCGCCCTCCCTCAGAAGATAGGGCTTAAGAGATGTGGGAAAAGCTGTCGTCTAAGATGGCTGAATTATCTTCGGCCAAACATAAAACATGGCAGTTTCTCAGAAGAAGAAGACAACATCATCTGCACCCTGTATGTTAGTATTGGAAGCAGGTGGTCAATTATAGCAGCACAGTTACCCGGGCGCACTGACAACGACATCAAGAATTACTGGAACACCAGGCTCAAGAAGAAGCTCCTTGCCAACCAAAGGAAACACCAACACCCCCCTCAAAAGAGATCCTCATCTTCACAAACCCACCCACCAATCATCACCACCCAACAACCTACTCCTTATTATTGCAATTGGCCTCCTTCTTCTTCTTCTTCCACTTCCAATTCTTCTTCTGGCTCTGAGAATTGTGTGGCCATGCCGCCACTACTAGCAGCTGCTTCCATCCATGACTACGACTTCAACTCCCTCCACCAATACTCATCCCAAGATACACAACAACACCTTTATCCACCAACAATCAACAACAGCACTGTCACTGTCACTTCTCTGTCATCCAATAATAACATGTATCACCTGCAGCAAGGGTTTGAAAACTTGACAGATGATGATCTGACCCATCTCATGGCGTGTGTTGTCAATCAGGAACAACAAATGGAAATGCAGCAGCAAGGTGGTTATTATGGGATGGATAATATGGCGGGTGGCAGCAGCAACACCACTTCAACAGAGAGCACTACTGCTTGGGGAGCTGATCTGGTTAACTACTCATCACCGCCACCTTTGCTTTCTGTTTCTGATTATGAAGTTGGTGGTGGTGGTTGTCGACAATCTATTCTATCTCATTATGATGATGATGCTGCTGCTTTCCAGGAACCTGCTGCTTCTAGGTACTTTGGAATGCAAATGCTATGA 1020 0.4647 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGSFSEEEDNIICTLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLANQRKHQHPPQKRSSSSQTHPPIITTQQPTPYYCNWPPSSSSSTSNSSSGSENCVAMPPLLAAASIHDYDFNSLHQYSSQDTQQHLYPPTINNSTVTVTSLSSNNNMYHLQQGFENLTDDDLTHLMACVVNQEQQMEMQQQGGYYGMDNMAGGSSNTTSTESTTAWGADLVNYSSPPPLLSVSDYEVGGGGCRQSILSHYDDDAAAFQEPAASRYFGMQML 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32476g00002 339 Gene3D - 7 68 - -
Stsc32476g00002 339 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Stsc32476g00002 339 MobiDBLite consensus disorder prediction 130 171 - -
Stsc32476g00002 339 PANTHER OS09G0431300 PROTEIN 1 265 - -
Stsc32476g00002 339 FunFam Transcription factor MYB36 70 139 - -
Stsc32476g00002 339 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Stsc32476g00002 339 MobiDBLite consensus disorder prediction 120 171 - -
Stsc32476g00002 339 CDD SANT 16 62 IPR001005 -
Stsc32476g00002 339 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Stsc32476g00002 339 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Stsc32476g00002 339 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Stsc32476g00002 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Stsc32476g00002 339 CDD SANT 70 113 IPR001005 -
Stsc32476g00002 339 Gene3D - 70 140 - -
Stsc32476g00002 339 FunFam Transcription factor RAX3 7 68 - -
Stsc32476g00002 339 SMART sant 67 115 IPR001005 -
Stsc32476g00002 339 SMART sant 13 64 IPR001005 -
Stsc32476g00002 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32476g00002 Stsc-Chr32476 4124 5553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32476g00002 1 123 MYB Transcription Factor Family AT3G49690 91.870 3.38e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Stsc32476g00002 Myb_DNA-binding 3.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32476g00002 K09422 - gmx:106795158 292.737