Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32402g00002 TTTTTATGTGATGTTGATGACAAGTATGTGCCAAAGGTTGGCATGCTTTTCGAATCTCTTGAGGCAGCTAGGATTTTTTATAGGGATTATGCTAAACGCGCAGGCTTCTCTACAAAAATAAGGAACACAAATAAGAGTAAGAAATCAAATGAAATTCTAAACCAGCTTCTTTCATGTAATAGAGAGGGGAAAAGGAGGTCGGAGTTAGCAGTTTCAGAGAAGACAAATCCTATATTTGCTCCTAATTGTCCAGCAAGAGTCTACGTGCATCATTTGAAGATAATTAGACTTTGGGAGATATCAAAGGTGGTTTTAGGACATTCATACTCTTGCTGTCCAAGTCAAGCAGAATTGTTTCCCCAATACCGAGAGCTGAGCATGTATGTTCGCTAG 393 0.3893 FLCDVDDKYVPKVGMLFESLEAARIFYRDYAKRAGFSTKIRNTNKSKKSNEILNQLLSCNREGKRRSELAVSEKTNPIFAPNCPARVYVHHLKIIRLWEISKVVLGHSYSCCPSQAELFPQYRELSMYVR 130
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc32402g00002 130 Pfam FAR1 DNA-binding domain 26 111 IPR004330 -
Stsc32402g00002 130 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 127 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc32402g00002 Stsc-Chr32402 7188 7580 Dispersed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc32402g00002 FAR1 2.8e-13 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32402g00002 - K13993 aip:110271906 160.614