Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32357g00001 ATGTCACCTTTCAATATCACATTTGTAGTCACAATTTTCCTCTCTCTTTTCTTCTCAACCCTTGCTAAAGTTGATCCAACATTAACGAGGCCTAAATCTCAAACATTATCATACATAGAGTCGTCTTGCAATGGCACCCTGTACCGCGAACTGTGTATCCGTTCCTTGTCGAAATTCGCAAACACGAACGACATAGACGGTCCGCAACACTTAGCACATGTTGCCTTGTCAATTAGCCTTACTAGGGCAATCCAAACAAAGAACTACATGGTGGGAGTTTCCAAGGAACTCAATGCAATGAACAACATCAATAATGACAACATCAACAACAACAAGATTGACAAGAAGAAGAGAAGGGAGTACCAAACAATTCAAGATTGTGTGAATCAACTAGGTGATAGTGTTGATCAACTTAGCCAATCCATCAAGGAGCTAAGAAGGATGAACAAGAAAAGTAACATGAGTGGATCATCATCATCATCATCAAGAATAAATGATGATTTCTTGTTTCACTTTAACAATGTTGAGACATGGGTTAGCACAGCCTTAACAGATGCAAGTAGTTGTGTGTATGCATTCCCAGGGCATAGAATGAGTAAGAGAACAGCTTCAATTAGGGGTAAGGCCATGAATGTTGCACAAGTTACTAGCAATGCATTAGCCTTCATTCATAAGTATATGGAAGCAGCATCAACAAATAACAAGCCTTGA 711 0.3938 MSPFNITFVVTIFLSLFFSTLAKVDPTLTRPKSQTLSYIESSCNGTLYRELCIRSLSKFANTNDIDGPQHLAHVALSISLTRAIQTKNYMVGVSKELNAMNNINNDNINNNKIDKKKRREYQTIQDCVNQLGDSVDQLSQSIKELRRMNKKSNMSGSSSSSSRINDDFLFHFNNVETWVSTALTDASSCVYAFPGHRMSKRTASIRGKAMNVAQVTSNALAFIHKYMEAASTNNKP 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32357g00001 236 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 222 - -
Stsc32357g00001 236 NCBIfam pectinesterase inhibitor domain 8 226 IPR006501 GO:0004857
Stsc32357g00001 236 FunFam Pectinesterase inhibitor 3 34 227 - -
Stsc32357g00001 236 Pfam Plant invertase/pectin methylesterase inhibitor 38 221 IPR006501 GO:0004857
Stsc32357g00001 236 SMART PMEI_2 34 222 IPR006501 GO:0004857
Stsc32357g00001 236 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 226 IPR035513 -
Stsc32357g00001 236 Coils Coil 128 148 - -
Stsc32357g00001 236 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 226 IPR035513 -
Stsc32357g00001 236 CDD PMEI-like_3 41 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32357g00001 Stsc-Chr32357 6888 7598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32357g00001 22 221 Carbohydrate Esterase AT5G53370 24.510 2.84e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32357g00001 - - gmx:100791798 233.802