Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32348g00001 ATGGGTTTTGGTAATTCAAGATCTGTAAGATTCGAAGATGATCTCGAGCTACCAAGAACATCTGCAAATAGCAAGAGTGAAAGTAGCAATGGTATTAAGCTCAAATATCACATTGATGGAACACAAATAGCAGAGGCTAGTTCCAACAAAAAGGCAGCAGGGAATAATAAGAAGTTCTTGAAAGGTAGAGTTTTATCAAGAGTTTTCTCAGAGGATTATGAGAGGGTTAAAAGAAGAAGAATCTTAGATCCTCGCGGGCAAGCGATCCACAGATGGAACAAGATCTTCTTGGTGGCAAGCTTGGTGTCTTTGTTTGTGGACCCTTTGTTCTTCTACTTGCCTGTGGTTCAAGATGAAGTGTGCATTGACATTGGAATAACACTTGAAGTTGTGCTCACATTCATAAGAACAGTTGGTGATGCCTTCTATATGATTCAGATTTTCACTAAGTTTCGCACTGCTTATGTTGCTCCTTCTTCAAGAGTTTTTGGAAGAGGTGAACTTGTTATAGACACTTCCAAGATTGCAGTTAAGTACCTTTTCAAGGAATTTTGGTTAGACTTTCTTGCTGCCCTGCCCCTTCCTCAGGTACCTTAA 597 0.3987 MGFGNSRSVRFEDDLELPRTSANSKSESSNGIKLKYHIDGTQIAEASSNKKAAGNNKKFLKGRVLSRVFSEDYERVKRRRILDPRGQAIHRWNKIFLVASLVSLFVDPLFFYLPVVQDEVCIDIGITLEVVLTFIRTVGDAFYMIQIFTKFRTAYVAPSSRVFGRGELVIDTSKIAVKYLFKEFWLDFLAALPLPQVP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32348g00001 198 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 67 197 - -
Stsc32348g00001 198 Pfam Ion transport protein 92 196 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Stsc32348g00001 198 SUPERFAMILY Voltage-gated potassium channels 83 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32348g00001 Stsc-Chr32348 1777 2468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32348g00001 58 197 Ion Channels AT2G28260 72.143 1.19e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32348g00001 K05391 - qsa:O6P43_028386 259.996