Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32263g00001 CCGAAGCAGATTCATGAGATTAAGGATTTCCTTCTAACTGCAAGGAGGAAGGATGCACGATCGGTGAAGATCAAGAGGAGCACAGATGTGGTGAAGTTCAAGGTTCGATGCTCCAAGTACCTCTACACGCTCTGTGTCTTTGACTCTGAGAAAGCTGATAAGTTGAAGCAAACGCTTCCTCCAGTGATTGAGTTTTTGGGATACGTTCCTCTCCTGAAGAGGCTTCCTAGCTCATCAGTGAAGGAGATATCTCAACTTCTT 261 0.4559 PKQIHEIKDFLLTARRKDARSVKIKRSTDVVKFKVRCSKYLYTLCVFDSEKADKLKQTLPPVIEFLGYVPLLKRLPSSSVKEISQLL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32263g00001 87 Pfam Ribosomal L38e protein family 1 63 IPR002675 GO:0003735|GO:0005840|GO:0006412
Stsc32263g00001 87 PANTHER 60S RIBOSOMAL PROTEIN L38 1 63 IPR002675 GO:0003735|GO:0005840|GO:0006412
Stsc32263g00001 87 Gene3D - 1 66 IPR038464 -
Stsc32263g00001 87 FunFam 60S ribosomal protein L38 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32263g00001 Stsc-Chr32263 1348 2760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32263g00001 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.803 5.84e-37 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32263g00001 K02923 - csin:114310042 122.479