Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32240g00001 ATGGCGGGAGTGGGTAAAACAACCCTTGCCAAAACTACCTATAATCAAATTCGTCACGACTTTGATAGTGCAATGTTCCTCCCAAACATTAGGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACTACTGTTGAATGGTATTTGCAAAGCAGGGATAGCAATAAAGAACATTGAATCAGGAGTAGCTTTATTAAAGGAAAGACCGCCTAAAAAGGACCAGTTGAATGCCTTGTGCGGAAGTCGAGATTGGTTTGGTCCAGGGAGTGAAATAATCATCACAACAAGAGATAGACGTCTACTTCGTAAGCTTGGAGTTGACAACATAAATCCAGTGAAAGACAAGGATCACCATGAATCTCTTGAACTTTTTAGTTGGAATGCATTTAAGCAAGCAAGTCCTTTAGAAGAGTTTGCTAAACTTACAGAAGATGTAGTTGCATATTGTGGGGGATTGCCATTAGCCCTTGTAACAATTGGTTGTCAACTGTTTGGAAAGATGAAAGACGAGTGGGAGACTGTATTAGGTGGACTCAAAAGGCGTCCCCATCCTGATGGTTTGGAAATGGGGGACACATTTTTTGTAGTTCCCATTTTCCACCACCGTGGAGAGCTGGTTTGGAACCCACTAGGGGAGCTCCAATATGCGAATGGGTTGGTGGAGAGGTTTAATTTGAAGAGATAG 690 0.4232 MAGVGKTTLAKTTYNQIRHDFDSAMFLPNIREMWENNQQVFLQELLLNGICKAGIAIKNIESGVALLKERPPKKDQLNALCGSRDWFGPGSEIIITTRDRRLLRKLGVDNINPVKDKDHHESLELFSWNAFKQASPLEEFAKLTEDVVAYCGGLPLALVTIGCQLFGKMKDEWETVLGGLKRRPHPDGLEMGDTFFVVPIFHHRGELVWNPLGELQYANGLVERFNLKR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32240g00001 229 Gene3D - 1 111 IPR027417 -
Stsc32240g00001 229 Gene3D - 118 191 IPR042197 -
Stsc32240g00001 229 Pfam NB-ARC domain 87 183 IPR002182 GO:0043531
Stsc32240g00001 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 187 IPR027417 -
Stsc32240g00001 229 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 182 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32240g00001 Stsc-Chr32240 7657 9228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32240g00001 1 184 WRKY Transcription Factor Family AT5G45050 30.808 2.19e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32240g00001 - - ahf:112727946 279.256