Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32215g00001 ATGCATTTCATCAAATTCAATAATCTTCTTCTTGTGATAGCTCTGGTTTCAACAACACTAGTCTCTTGTTATGCATACCCTGGCTTCAATTTCGGTTGGGGTGGAAGAAACCATGGAAGTAGGGGAGGAAGAGGAATATCTTATGGTCTTTCTCCTCAGTTCTACCAATTTTCATGCCCTCAAGCCAATGACATAGTCATGTCAGTCTTGGAGAAAGCCATGGCTAGAAACATGAGAATTGCTGCTTCTCTTCTTAGACTTCACTTCCATGATTGCTTTGTCCAGGGCTGCGATGCTTCGATTTTGCTGGACGATAGCCCGGCGATAGTAAGCGAAAAGAACTCCGGCCCGAACAAGAATTCTGTCCGAGGATTCGAGGTGATCGACGAGATAAAGGCTAAGTTGGAAGAAGCATGCCCTCAGACTGTGTCTTGTGCAGACATTCTTGCTCTTGCAGCAAGAGGCTCCACTATTCTTAGTGGAGGGCCTAACTGGGAGCTACCATTAGGGAGAAGAGACTCAAGTAAAGCAAGTTTAATTGGTTCAAACAATAACATTCCACCACCAAATGCCACCATTGAAAATCTAATTACATTTTTCAAGCGTCAAGGCCTTGATGAAGTTGATCTTGTTTCCCTCTCAGGTGCACATACCATTGGGGTGGCAAGGTGTGCAACATTCAAGCAAAGACTATACAATCAAAATGGAAAGAATGAAGCAGATGTGTCAATAATAGAAAGAACCTTCTTCTTTGGTCTGAAGACAATGTGTCCAAGATTAGGTGGTGACAACAACATTTCCCCATTGGACTTTGGTTCTCCAAGGATGTTTGATAACACATACTTCAAGCTCATTCTTCAAGGAAGAAGCTTACTCAATTCTGATCAAGTTCTTCTCAAGGGTGGTGTCAAGAAGACTCAAGAACTTGTCAAGAAATATGCTCAAGATGAGGGTTTGTTCTTCCAACAATTTGCTATTTCTATGGTTAAAATGGGAAACCTTCGCCCCATTACCGGATTTAACGGCCAAGTTAGAAAGAATTGTCGCCGACCTAATTAA 1059 0.423 MHFIKFNNLLLVIALVSTTLVSCYAYPGFNFGWGGRNHGSRGGRGISYGLSPQFYQFSCPQANDIVMSVLEKAMARNMRIAASLLRLHFHDCFVQGCDASILLDDSPAIVSEKNSGPNKNSVRGFEVIDEIKAKLEEACPQTVSCADILALAARGSTILSGGPNWELPLGRRDSSKASLIGSNNNIPPPNATIENLITFFKRQGLDEVDLVSLSGAHTIGVARCATFKQRLYNQNGKNEADVSIIERTFFFGLKTMCPRLGGDNNISPLDFGSPRMFDNTYFKLILQGRSLLNSDQVLLKGGVKKTQELVKKYAQDEGLFFQQFAISMVKMGNLRPITGFNGQVRKNCRRPN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32215g00001 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 209 219 IPR019793 -
Stsc32215g00001 352 Gene3D Peroxidase, domain 2 187 332 - -
Stsc32215g00001 352 PANTHER PEROXIDASE 72-RELATED 49 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Haem peroxidase superfamily signature 143 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Haem peroxidase superfamily signature 161 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 CDD secretory_peroxidase 49 350 IPR033905 GO:0004601|GO:0042744
Stsc32215g00001 352 Pfam Peroxidase 68 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601
Stsc32215g00001 352 ProSiteProfiles Plant heme peroxidase family profile. 49 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 FunFam Peroxidase 53 194 - -
Stsc32215g00001 352 SUPERFAMILY Heme-dependent peroxidases 49 352 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 Gene3D - 54 352 - -
Stsc32215g00001 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Stsc32215g00001 352 FunFam Peroxidase 187 331 - -
Stsc32215g00001 352 PRINTS Plant peroxidase signature 326 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc32215g00001 352 PRINTS Plant peroxidase signature 208 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32215g00001 Stsc-Chr32215 4104 6626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32215g00001 25 349 Peroxidase AT1G44970 72.000 7.02e-169 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32215g00001 K00430 - gmx:100795020 551.592