Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32209g00001 ATGGTTGGTGTTGGAGTTATTGTAATCTTCATTGCGATTGTTTATGATCATAGGAAGTGTTTCAATTTACTACAAAGGATGACACGAAAGAAAGAAGCATTTGTTGAACAGAAAGTTGATGAGCTGCTTAAAAGTTACGGTATTTCAACTCCAATTAGATATACTTATGCACAAGTGAAACAAATGACAAATTCATTTTATGAAAAATTAGGCCAAGGAGGATATGGTATTGTGTACAAAGCAAGTTTAATGGATGGTCGTCAAGTGGCAGTGAAAGTACTTAAGGAGTCAAAAGATTTTGGACTTGCTAAGATATGCAAAATGGACGAAAGTATTGTGTCTATTTTGGGCACGAGAGGGACTCCAGGTTATATTGCACCAGAAATGTTTAGTCGGATATATGGCGAAGTTTCGCACAAATCTGATGTTTATAGTTATGGAATGCTAATTCTTGAAATGATTGGAGGAAGAAAGAACTATGACACTGGAGGAGAATCTCATAGCGATGACTTGTACTTTCCTAATTGA 528 0.358 MVGVGVIVIFIAIVYDHRKCFNLLQRMTRKKEAFVEQKVDELLKSYGISTPIRYTYAQVKQMTNSFYEKLGQGGYGIVYKASLMDGRQVAVKVLKESKDFGLAKICKMDESIVSILGTRGTPGYIAPEMFSRIYGEVSHKSDVYSYGMLILEMIGGRKNYDTGGESHSDDLYFPN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32209g00001 175 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
Stsc32209g00001 175 PANTHER RUST RESISTANCE KINASE LR10-RELATED 37 97 IPR045874 GO:0004672
Stsc32209g00001 175 Pfam Protein kinase domain 99 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc32209g00001 175 Gene3D Transferase(Phosphotransferase) domain 1 57 97 - -
Stsc32209g00001 175 SUPERFAMILY Protein kinase-like (PK-like) 54 164 IPR011009 -
Stsc32209g00001 175 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc32209g00001 175 Gene3D Transferase(Phosphotransferase) domain 1 98 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32209g00001 Stsc-Chr32209 1123 1981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32209g00001 99 174 Receptor kinase-like Gene Family AT1G66980 62.821 4.20e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc32209g00001 Pkinase 9.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32209g00001 - - rcn:121050588 141.739