Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32187g00001 CCATACCTGCAAATCTTTGTGATCCATCCTTCCCCAATATTATTCCCATTGAAGCCACAACCCCAATCTTTGCATGCTTTAGCAATTCCCATCCCTACAAATGCCACACTCTTCTATATCTCTACTCTCAGCACTTCCCTCATGGCTCCTCCGTGGGTCCAAGAGCTCCATCTCCCTCATCTCACTGTCCCTGTCACCATCGACAACGTATTCCCTGTCATGCCATCCCAACCCATACCTGTTCAAGACGGAGACACCCTTTACCTCTCCAACCTTGACGACATGATCGGAGCTCGTGTCTTTACACCCACCGTGTACTTTTACCAACACACCACCACCACCACCAGTTGTGCCAATTCACAAAAACCAATAACCAAAACACTTAAAGATGCCCTTGCTGATGTCTTGGTCCCTTACTACCCTCTCTCAGGGAGGCTAAGGGAAACCAAGAATGGGAAATTAGAAGTGTTCTTTGGTCCAAGCCAAGGTGCACTCATGGTTGAGGCACATTCTGATGTGACATTATCCGAATTAGGAGACCTCACTGCACCAAACCCAACTTGGGAGCCATTAATATTCAAGTTCCCTAATGAAGAGCCATACAAAGTCCTTGACATGCCGCTTGTAATAGCACAAATCACAATCTTCCGCTGTGGTGGATTTAGCCTCGGGTTGCGACTTTGCCATTGCATCTGCGACGGCCTAGGAGCCATGCAGTTCCTAGGCGCGTGGGCTTCAACGGCAAAGGCTAGGACTTTGGTAACAAACCCGAAGCCAGTTTGGGATAGAGAGGTTTTCAAACCGCGAGACGCTCCTCGTATACAATTCCCTCACATAGAGTTTATGAAAATTCAAGAAGGCTCAAATCTCACTATGTCATTATGGGAAACTAAACCATTACAAAAATGCTACCGGATCACGCGCGAGTTCCAAAACTTTCTAAAATCCCTTTCCATGCCACATGACGGTTATGGTTGCACAACATTCGATGCAATGGCCGCACACGTGTGGAGGTCGTGGGTCAACGCCCTCGACGTGAGACCGTTGACCTATGACTTAAGGTTGACTTTTTCTGTCAACGCAAGACAAAAGCTTCGAAACCCACCTCTAAGAGAAGGATTCTATGGCAATGTAGTGTGCGTGGCTTGCACAACAAGCAAAGTTTCAGAGCTTGTGAACCCTGAACGACTTTCGGAGACAACCAGGTTGGTTCGAGAAGCAAGACTTAGCGTGTCGGAGGAGTATTTGCGGTCAACGGTGGATTTCGTTGACTTGGAGAGGCCTAAGCAGCTTGAATTTGGAGGGAAGCTAACCATAACTCAATGGACAAGATTTTCAATCTATAACTGCACAGATTTTGGTTGGGGTAGACCACTATATGCTGGGCCTATTGACTTGACTCCTACACCTCAAGTTTGTGTTTTTTTACCGGAAGGACAAGAGGGTGGTGGTGGTGGTGGATCTATGATTGTGTGTATATGTTTGCCTGAATCTGCTGCTCATAAGTTTGCTCAAGCATTCATGTTGTTGGATAACTCATAA 1542 0.4682 PYLQIFVIHPSPILFPLKPQPQSLHALAIPIPTNATLFYISTLSTSLMAPPWVQELHLPHLTVPVTIDNVFPVMPSQPIPVQDGDTLYLSNLDDMIGARVFTPTVYFYQHTTTTTSCANSQKPITKTLKDALADVLVPYYPLSGRLRETKNGKLEVFFGPSQGALMVEAHSDVTLSELGDLTAPNPTWEPLIFKFPNEEPYKVLDMPLVIAQITIFRCGGFSLGLRLCHCICDGLGAMQFLGAWASTAKARTLVTNPKPVWDREVFKPRDAPRIQFPHIEFMKIQEGSNLTMSLWETKPLQKCYRITREFQNFLKSLSMPHDGYGCTTFDAMAAHVWRSWVNALDVRPLTYDLRLTFSVNARQKLRNPPLREGFYGNVVCVACTTSKVSELVNPERLSETTRLVREARLSVSEEYLRSTVDFVDLERPKQLEFGGKLTITQWTRFSIYNCTDFGWGRPLYAGPIDLTPTPQVCVFLPEGQEGGGGGGSMIVCICLPESAAHKFAQAFMLLDNS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32187g00001 513 Gene3D - 63 283 IPR023213 -
Stsc32187g00001 513 Gene3D - 291 509 IPR023213 -
Stsc32187g00001 513 Pfam Transferase family 65 507 - -
Stsc32187g00001 513 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 73 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32187g00001 Stsc-Chr32187 8508 10051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32187g00001 65 509 Monolignol Biosynthesis Gene Families AT5G48930 28.758 3.53e-48 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32187g00001 K15400 - gmx:100802814 752.281