Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32167g00001 ATGTCTCTGCTTCTTCTTAAGCTTCAAGTCTTCCTCTTTCTGATATGTGCTTCTCCATCTGCTCTTCCTTCAAAGACCACCGAGCTTGACATTCTCATGACTATCAGAGACTCTCTTGACCCACAAAACCGGGTCTTGACTTCGTGGACCCCACACTCTGACCCATGTAGCAGTGTCGCTGGTGTTTTTGAGGGCGTGGCTTGCAACCAAGAAGGTCTTGTAGCCAATATCTCACTGCAAGGAAAGGGTCTCTCTGGAAGAATACCTTCAGCCATTTCCGGTCTTAAGAGCTTGACGGGTCTCTATCTTCACTTCAACGCTCTCAATGGAATTTTACCCAAGGAGATTGCTGCCTTGACTCACCTCACTGACTTGTATCTCAATGTCAATGAACTCTCTGGTGATATCCCTCGTGAGATTGCCAACCTCTCTAATCTTCAAGTTTTGCAGATTAGCTATAACGAGTTCACTGGCGGTGTGCCTTCTGAACTGAAGAAGTTGAAGAAGCTTAGCGCTCTTTCGGTTCAATATAATCAATTAAACGGCGCAATTCCAGCAAGTTTGGGTGAATTGGAGTCACTAACACGATTAGATCTGAGCTTCAACCAATTTTTTGGTCCAATCCCTGTGAATTTGGCTTATGCACCCAAACTGAAGATTCTAGATGTTCGAAACAATTCTCTCTCGGGGAATATCCCCAAAGCACTAGAAAGACTTAAAGGTGGATTCCAGTACATGAACAACCCTGGTTTATGCGGAATCGGATTCGCCAATTTAGCTCCTTGCAAAGCAGTAATCAGTAGTTCAGACCCGATCAGGCCAGAACCATATGAGCCTCGTAATCTTTCTACAGAAGTTCTTCCAACAACTGTTCAACCAAAAGATATAAAGCCATCAAAATCATCGAATATTGGTTTGGTTTTCGGGGTGATTGCAGTTACTTTCGCTTCAACTATCTTTGGCCTGTTTATAGTCTTATGGTACCGACATCAGAAATTGAAACTTGGGACCACTGCTAACACTACTGATACTCGGCTTAGTCTTAACAAGATCAGGGAACCGCGCAGGAAAATTGCATCTCCTCTGATAAGTTTAGAGTACTCCAATGGATGGGATCCTTTAGCCAAAGGTCAAAGTGGTTACTCCCAGGAGTTTCTAGAGAGCTTAATGTTCAATCTTGAAGACATCGAGCGCGCAACGCAGTGTTTCTCGGAGCTAAATCTGTTGGGGAAGAGTGATTTTTCAACTGTGTACAGGGGAATACTAAGAGATGGATCTGTTGTGGTAGTAAAGTGCATTGCCAAAACAAGCTGCAAGCCTGATGAAACTGAGTTCTTGAAAGGGTTGAAGATATTGGCCTCACTGAGGCATGAAAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCCAAGAGCCGTGGGGAATGCTTTCTGGTCTATGATTTTGTCTCGAATGCGAGTTTGTTACGGTACCTTGATGTTAAGAGAGATGATGATGATGATGCTATAGTTCTTGAGTGGTCCACAAGAGTATCCATCATCCATGGTATTGCTAAAGGTATTGCTTATCTGCATGGAAAGAAAGGAAGCAAAGGCAGTCTAGTTCACCAGAATTTATCAGCCCATACAGTTCTTCTTGATTCTCGCTACAATGCCGTTCTTGCATATTCGGGATTGCACAAACTACTCGCTGACGATGTTGTCTTCTCCACCCTTAAAGCTAGTGCAGCCATGGGATATCTGGCTCCGGAATACACGAAAACCGGTCGTCTAACTGAGAAGAGTGATGTGTATGCATTTGGGGTGATGGTTTTCCAGCTTCTTAGTGGTAAACGTGACATCACTCAGTTAAGTCGCCAGGGGGTGGAAACTGTCAGTTACAGAGATGTAGTAGATGAGAAACTTGAAGGGAAGTTCTCAGAATCAGAGGCTGCGAAACTGTGGGGTGTTGCTCTGCTTTGCACCCATAAATCTCCCCATCTCCGGCCATATATGGAAGATGTGATTCAAGAACTGTGTGATTAA 2022 0.4416 MSLLLLKLQVFLFLICASPSALPSKTTELDILMTIRDSLDPQNRVLTSWTPHSDPCSSVAGVFEGVACNQEGLVANISLQGKGLSGRIPSAISGLKSLTGLYLHFNALNGILPKEIAALTHLTDLYLNVNELSGDIPREIANLSNLQVLQISYNEFTGGVPSELKKLKKLSALSVQYNQLNGAIPASLGELESLTRLDLSFNQFFGPIPVNLAYAPKLKILDVRNNSLSGNIPKALERLKGGFQYMNNPGLCGIGFANLAPCKAVISSSDPIRPEPYEPRNLSTEVLPTTVQPKDIKPSKSSNIGLVFGVIAVTFASTIFGLFIVLWYRHQKLKLGTTANTTDTRLSLNKIREPRRKIASPLISLEYSNGWDPLAKGQSGYSQEFLESLMFNLEDIERATQCFSELNLLGKSDFSTVYRGILRDGSVVVVKCIAKTSCKPDETEFLKGLKILASLRHENLVRLRGFCCSKSRGECFLVYDFVSNASLLRYLDVKRDDDDDAIVLEWSTRVSIIHGIAKGIAYLHGKKGSKGSLVHQNLSAHTVLLDSRYNAVLAYSGLHKLLADDVVFSTLKASAAMGYLAPEYTKTGRLTEKSDVYAFGVMVFQLLSGKRDITQLSRQGVETVSYRDVVDEKLEGKFSESEAAKLWGVALLCTHKSPHLRPYMEDVIQELCD 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32167g00001 673 FunFam Protein NSP-INTERACTING KINASE 2 25 177 - -
Stsc32167g00001 673 FunFam Protein NSP-INTERACTING KINASE 2 375 481 - -
Stsc32167g00001 673 Gene3D Phosphorylase Kinase; domain 1 375 481 - -
Stsc32167g00001 673 Pfam Protein tyrosine and serine/threonine kinase 407 671 IPR001245 GO:0004672|GO:0006468
Stsc32167g00001 673 PANTHER LEUCINE RICH REPEAT KINASE 2 77 672 - -
Stsc32167g00001 673 SUPERFAMILY L domain-like 27 240 - -
Stsc32167g00001 673 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Stsc32167g00001 673 Gene3D Ribonuclease Inhibitor 143 260 IPR032675 -
Stsc32167g00001 673 Gene3D Transferase(Phosphotransferase) domain 1 484 673 - -
Stsc32167g00001 673 CDD STKc_IRAK 409 672 - -
Stsc32167g00001 673 Pfam Leucine rich repeat 144 204 IPR001611 GO:0005515
Stsc32167g00001 673 ProSiteProfiles Protein kinase domain profile. 403 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc32167g00001 673 Gene3D Ribonuclease Inhibitor 27 142 IPR032675 -
Stsc32167g00001 673 Pfam Leucine Rich Repeat 217 239 IPR001611 GO:0005515
Stsc32167g00001 673 SUPERFAMILY Protein kinase-like (PK-like) 380 671 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32167g00001 Stsc-Chr32167 3165 7525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32167g00001 4 519 Miscellaneous Gene Families AT4G22730 46.642 2.78e-157 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Stsc32167g00001 PK_Tyr_Ser-Thr 6.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32167g00001 - - vun:114183221 867.455