Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32151g00001 ATGCAAGCTAAGATACCTAGGTCCTTGGTGGGGAATTTCAGCGAAGTGCTGAAGGAGTTCAACATGTACACAATGACAAACTTCATCGTGGCTGATACCAAGCCAAGGACTAGGGCCACTACCAATCCGCTGATACTCCTATTCTCACAAAGAAATGTGGTTGAGCCAATTTTTCAACCTATATTTCAGCTCAGCGCATTTGTGTTCAAGACCATGTCAGATTTGCTGGGTGCCGAGAGAGTCAATGAGTTTGAGTTTTTTGATATTATTGGTGTCGTTGTGGAAAGGGAGCAAGCTCGGGATATCACAACTAAGGGTGGCGTGAAGACGAAAAGGATGGCCATCACCCTTCAGGATTTGAGCATCAACTGTGTTTTGTTTGGGAGCATGGTTGATCAAATCACTCCTCACCTTGACGCTGATTGTGATGAACCATTGAGTTACTTTGATCTTTCTAAGTTGATCATCAAGGAGGTTATGGACTTCAAAGACACACTGCAAGGGGAAAGTCCCTCCACGGGTATTAGAATTAGTCAGCATTCAACACAGAGTGGCGTGTCTGCTATTGATGAGCTCAAGAAAGGGGATGCAATTGTTAGAAGTATTGAGGAAGTTAGCACAATGAAACAGGAAGCTACTGTGTGGATTCGTGCTTCTATTGTGGCAATTAATACTGCCAAGAAAGATTGGTACTATAAAGCATGCAAAGGATGTCATAAGAAGATCGAGGCATCTGTCAAGAATGAATTTGATTGCAAGTATTGTGGCAGGAAGAACTCCAAGGTTGATTTCAGGTACAAATTAGAGGTGTTAGCATATGACGGGACTAGGATTATCCATCTACTTCTGTGGGATGGGGAGACAGCTAGGTTGTCTGGAATAACTGCAAAGAAACTTGCAAAACAACATGTAGGCAACTCACTTTACTGTCTTTTTGAAAGTAAGAAGCCCACAGTAATTTGCCCAGGATCGCTCTAA 978 0.4284 MQAKIPRSLVGNFSEVLKEFNMYTMTNFIVADTKPRTRATTNPLILLFSQRNVVEPIFQPIFQLSAFVFKTMSDLLGAERVNEFEFFDIIGVVVEREQARDITTKGGVKTKRMAITLQDLSINCVLFGSMVDQITPHLDADCDEPLSYFDLSKLIIKEVMDFKDTLQGESPSTGIRISQHSTQSGVSAIDELKKGDAIVRSIEEVSTMKQEATVWIRASIVAINTAKKDWYYKACKGCHKKIEASVKNEFDCKYCGRKNSKVDFRYKLEVLAYDGTRIIHLLLWDGETARLSGITAKKLAKQHVGNSLYCLFESKKPTVICPGSL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32151g00001 325 Pfam Replication factor-A C terminal domain 217 303 IPR013955 -
Stsc32151g00001 325 SUPERFAMILY Nucleic acid-binding proteins 209 306 IPR012340 -
Stsc32151g00001 325 Gene3D - 79 164 IPR012340 -
Stsc32151g00001 325 Gene3D - 175 315 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32151g00001 Stsc-Chr32151 7646 9200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32151g00001 67 299 Core DNA Replication Machinery Family AT2G06510 25.185 2.96e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32151g00001 - K07466 aip:107635329 257.299