Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc32100g00001 | ATGGATTGGGTAAGAGGAGACCCTATTGGTCGAGGGAGCTTCGCCACCGTTAGTTTGGCGATTCCAAGAAACTGTTATTCTGTTAAGTCATTGCCTTATCTAACCGCAGTGAAATCCAGCGACGCCAGCGCCTCCTACTGGCTAAAGAACGAGAAGCACGTGCTGGACCGCCTCGGCGGCACGTGCCCCCGAATCATCACCTGCTTTGGCGATGACTACACCTTGGAGAACGGCCGCCACTACTACAACCTCTTCCTGGAGTACGCCTCCCGCGGCAGCCTCTCCGACGAGCTTCGCCGCTGCCGTCTCTCGGAAGCTGAAATTCGGCACCACGTGAAGTCCATCGTTGAAGGTCTGGATCATATTCACAAGAACGGATTCGTACACTGTGATATAAAGCTTCAGAACATACTCGTCTTCGAAAACGGTGAAGTTAAGATTGCGGATTTTGGTTTAGCGAAAGAAACAGGGGAAGAAAAACAGGGGAATAATGGCAAGAAGTGTTTCGAATGCAGGGGAACTCCTATGTTTATGCCGCCGGAATCGGTTAACGACGGCGAGTGCGAGTCTCCGGCGGATATTTGGGCCTTGGGGTGCACGGTGGTGGAGATGGTGACCGGGAAGCCGGCATGGAACATTGCGAACGATTCGAGCATTTGGTCGTTGCTGCTTCGGATCGGAACAGGGGAAGAAGTGCCGGCAATACCAGATGAAATTTCGAAACAAGGGAAGGATTTCTTGGAGAAGTGTTTTGTTAAGGATCCTAAGAAGAGATGGACGGCTGAGATGCTTCTAAATCATCCCTTTCTGGCTTTTGATTCTGATACTGTTTCATTGAAACTGGGTGTGATTGCAAAGGAAAACGAATCCCCAAGAAGCCACTTTGATTTTCCTGATTGGGTTTCTAGTCTTGATTCTTCTTCATTTCCGAGTTCGCACGATTGGGATTCCGATTCCTCGTCGAGTTCGTTTTCGGCGGTGGATCGGCTTCGCAAGCTTGCGACGGGGGGTCGGATGCCGGAGAATTGGCCGGAATCCGATGGGTGGACAAGTGTCAGGTGGAATTGA | 1068 | 0.5103 | MDWVRGDPIGRGSFATVSLAIPRNCYSVKSLPYLTAVKSSDASASYWLKNEKHVLDRLGGTCPRIITCFGDDYTLENGRHYYNLFLEYASRGSLSDELRRCRLSEAEIRHHVKSIVEGLDHIHKNGFVHCDIKLQNILVFENGEVKIADFGLAKETGEEKQGNNGKKCFECRGTPMFMPPESVNDGECESPADIWALGCTVVEMVTGKPAWNIANDSSIWSLLLRIGTGEEVPAIPDEISKQGKDFLEKCFVKDPKKRWTAEMLLNHPFLAFDSDTVSLKLGVIAKENESPRSHFDFPDWVSSLDSSSFPSSHDWDSDSSSSSFSAVDRLRKLATGGRMPENWPESDGWTSVRWN | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc32100g00001 | 355 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 127 | 139 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc32100g00001 | 355 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 38 | IPR017441 | GO:0005524 | |
Stsc32100g00001 | 355 | Pfam | Protein kinase domain | 6 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc32100g00001 | 355 | ProSiteProfiles | Protein kinase domain profile. | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc32100g00001 | 355 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 322 | IPR011009 | - | |
Stsc32100g00001 | 355 | CDD | STKc_MAPKKK | 2 | 270 | - | - | |
Stsc32100g00001 | 355 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 303 | - | - | |
Stsc32100g00001 | 355 | MobiDBLite | consensus disorder prediction | 335 | 355 | - | - | |
Stsc32100g00001 | 355 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 3 | 334 | - | - | |
Stsc32100g00001 | 355 | SMART | serkin_6 | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc32100g00001 | Stsc-Chr32100 | 7433 | 8500 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc32100g00001 | 1 | 353 | MAP Kinase Kinase Kinase | AT5G67080 | 50.689 | 5.94e-116 | 338 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Stsc32100g00001 | Pkinase | 2.3e-54 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc32100g00001 | - | - | gmx:100798607 | 447.588 |