Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc320g00001 ATGGAATCCAACAATGAACTAGGTAGTGGCATGTTCTCTGTCATAGGTTCTAGTTTCTTAGGATTAGACCATATCAACAACAACAACAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACACAACAACAAAATCTTCAACAAAGAAACCAACCCCAAATGGTTCAATTTGGTTCTTCTTCTTCTTCTCATCATCAACAACAACAAATCAATTATGGGAATACTAATTCATCTAAGAACAAGCACCACCAACAAGGTTCTACTCTAAGTGATGAAGATGAATTACAAGGATTCAATAATAATAATGCAGATGCTGATGATAGTAATAGTAACAAGATGAAGAACATTATTAGTAGTAGTATCTCATCACCATGGCAGAGAATGAAATGGACTGATACTATGGTTAGGCTCTTGATAATGGCTGTTTACTACATTGGTGATGAAGGTGGTGGTGGTGCCAGCGGCAGCGGCGGCAACGGTGGTGGTTCATCAGAAGCAAGTGCTGATCCAAATGGGAAGAAGAAGATACTGATGATGAACAAGCAGGCACAACAACAACAAGGAGGAGGAGGGTTGATTCTTCAGAACAAGAAAGGGAAGTGGAAATCAGTGTCAAGAGCAATGATGGAGAAAGGTTTCTATGTGTCACCACAACAGTGTGAGGACAAGTTCAATGATCTGAACAAGAGGTACAAGAGGGTCAATGATGTTCTTGGAAGAGGAACAGCTTGCAAGGTTGTTGAGAATCACAAGTTGTTGGAAACAATGGATCACTTGTCCCCAAAGGCCAAGGAAGAAGTGAAGAAGTTGCTCAATTCAAAGCACCTTTTCTTTAGAGAGATGTGTGCTTATCATAATAGTTGTGGCCATGGTGGTGGTGATGTTTCTCATCATCATCAATCTCAATTTCAACAAGAGAAAGAACAAGGGGAGAAAGAAATAGATAGTGATGATGATGATTACGACGACGACGATGATGACGATGATTCTGATGATTCTTTTGATGAGGATGAAGATGAATTAGGAGAAGGTGGTTCAAAGGGTCATCATCATGATAATAAGAGGCAAAAGAAATCATCATCATCATCATCATGTGAATTGATGATGAAAGAGCTTAGCAATGAGGTGAATGGTGTGTTGGAAGATAAGGGAAAGAGTGTTTTGGAGAAGAAGCAATGGTTAAGGAACAAGATAGTGAAGTTGGAGGAGAAGCAAATAAGGTATGAAGGAGAAGGGTTTGAGATTGAGAAACAAAGGTTGAAATGGAGAAGGTATAGTAGCAAGAAGGAGAGGGAGATGGAGAGAGCAAAGCTTGATAATGAGAAGACAAGGTTGGAGAATGAGAGAATGATTTTGATCATTCACCAAAAGGAACTTGAATTCAAACTTCAACAACATTGA 1419 0.3798 MESNNELGSGMFSVIGSSFLGLDHINNNNNNNNNNNNNNNNNNNNNTQQQNLQQRNQPQMVQFGSSSSSHHQQQQINYGNTNSSKNKHHQQGSTLSDEDELQGFNNNNADADDSNSNKMKNIISSSISSPWQRMKWTDTMVRLLIMAVYYIGDEGGGGASGSGGNGGGSSEASADPNGKKKILMMNKQAQQQQGGGGLILQNKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDVLGRGTACKVVENHKLLETMDHLSPKAKEEVKKLLNSKHLFFREMCAYHNSCGHGGGDVSHHHQSQFQQEKEQGEKEIDSDDDDYDDDDDDDDSDDSFDEDEDELGEGGSKGHHHDNKRQKKSSSSSSCELMMKELSNEVNGVLEDKGKSVLEKKQWLRNKIVKLEEKQIRYEGEGFEIEKQRLKWRRYSSKKEREMERAKLDNEKTRLENERMILIIHQKELEFKLQQH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc320g00001 472 PANTHER F16F4.11 PROTEIN-RELATED 1 470 - -
Stsc320g00001 472 MobiDBLite consensus disorder prediction 296 372 - -
Stsc320g00001 472 Pfam Myb/SANT-like DNA-binding domain 200 289 IPR044822 -
Stsc320g00001 472 Coils Coil 432 454 - -
Stsc320g00001 472 MobiDBLite consensus disorder prediction 318 347 - -
Stsc320g00001 472 MobiDBLite consensus disorder prediction 25 118 - -
Stsc320g00001 472 Gene3D - 136 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc320g00001 Stsc-Chr320 2064 4495 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc320g00001 Myb_DNA-bind_4 3.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc320g00001 - - ahf:112728885 558.525