Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc3206g00001 GCTGAGTTTAAGGAGAAGCTGGCAAGGATGTATGAGGTGAAGGATTCCAACACCGTCTTTGTCTTCAAATTCCGTACAAATCTTGGTGGTGGCAAATCGACTGGCTTTGGTTTGATTTATGATTGTGTTGACAATGCAAAGAAGTATAAGCCCAGGTACATGCTAATCACGGTCAGTCTATTCCGAAATCCCAACACATTCAATTCATACTGA 213 0.4178 AEFKEKLARMYEVKDSNTVFVFKFRTNLGGGKSTGFGLIYDCVDNAKKYKPRYMLITVSLFRNPNTFNSY 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc3206g00001 70 Gene3D - 1 66 - -
Stsc3206g00001 70 PANTHER 40S RIBOSOMAL PROTEIN S24 2 61 IPR001976 GO:0003735|GO:0005840|GO:0006412
Stsc3206g00001 70 Pfam Ribosomal protein S24e 2 56 IPR001976 GO:0003735|GO:0005840|GO:0006412
Stsc3206g00001 70 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 2 57 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc3206g00001 Stsc-Chr3206 374 586 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc3206g00001 1 60 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 70.000 1.23e-26 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc3206g00001 K02974 - gmx:100802918 100.138