Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32024g00002 ATGAACGAAGTGCAGATCCTCACCCGTTTGCGCCACAAGAATCTTGTGTCCCTCTATGGCTGCACTTCTCGCAAGAGCCGCGAACTACTGCTTGTATATGAGTATATTCCCAACGGAACCATTGCTTCTCATCTTCATGGTGAATTAGCAAAGCCTGGCTTACTACCATGGTCAAAAAGAATCAAAATTGCTGTGGAGACTGCCAGTGCTTTAGCTTATCTCCATGCAACTGACATCATCCACCGCGACGTGAAAACCAACAATATTCTTCTTGATGACAGTTATTCTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTGTTCCCCAACGATGTTACCCATGTATCCACGGCGCCACAGGGAACTCCGGGTTATGTAGACCCGGAGTATTACCAATGCTATCAGCTTACAAGCAAGAGTGATGTGTATAGTTTTGGAGTTGTGCTTATGGAATTGATATCGTCTAAGCCAGCTGTTGATATGAGCAGAGACAAGGATGAGATTAATTTGTCAAGTCTAGCCATAAAAAAGATTCAAGAAAGTGCACTTGTTGAGCTTGTTGACCCTTCACTTGGTTTTGATTCCGACAATGAGGTTAAGAGGATGGTTGTTTCCGTGGCGGAATTGGCTTTTCAGTGTTTGCAAAGGGACAAGGACTTGAGACCTTCAATGGATAAAGTGTTGGAGGTGCTCAAGACAATTGAGAGTGGGAAGAAGAATGATGATGAGGCAGAGCATCTAGAGGTAGTAGATGGTTTACCAGGTAATGTAAATTCACCAGAATGGGACCAAATTGGGCTGGTGAAGAATGTGAAGCCACCTTCTTCGCCAGTAACTGTTACTGATAGTTGGGAAAGTAAATCCACTACACCTAACGTTAGTGGTTAA 888 0.4358 MNEVQILTRLRHKNLVSLYGCTSRKSRELLLVYEYIPNGTIASHLHGELAKPGLLPWSKRIKIAVETASALAYLHATDIIHRDVKTNNILLDDSYSVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLMELISSKPAVDMSRDKDEINLSSLAIKKIQESALVELVDPSLGFDSDNEVKRMVVSVAELAFQCLQRDKDLRPSMDKVLEVLKTIESGKKNDDEAEHLEVVDGLPGNVNSPEWDQIGLVKNVKPPSSPVTVTDSWESKSTTPNVSG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32024g00002 295 MobiDBLite consensus disorder prediction 274 295 - -
Stsc32024g00002 295 FunFam Wall-associated receptor kinase-like 20 36 244 - -
Stsc32024g00002 295 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc32024g00002 295 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 289 IPR044652 GO:0004672
Stsc32024g00002 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Stsc32024g00002 295 Pfam Protein kinase domain 2 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc32024g00002 295 SUPERFAMILY Protein kinase-like (PK-like) 1 232 IPR011009 -
Stsc32024g00002 295 MobiDBLite consensus disorder prediction 267 295 - -
Stsc32024g00002 295 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Stsc32024g00002 295 Gene3D Transferase(Phosphotransferase) domain 1 37 249 - -
Stsc32024g00002 295 SMART serkin_6 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32024g00002 Stsc-Chr32024 5553 7687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32024g00002 1 295 Receptor kinase-like Gene Family AT1G25390 65.203 5.71e-135 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc32024g00002 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32024g00002 - - aip:107643858 507.294