Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc32024g00001 ATGAGTTCTTTGCCAGCATGCACACCTATCAACCTTCCAATCAAAGACTTCCTGGATTCTCAAGATCCGTTTACCTTTGTAACTGCTAATTTATTAACTCTGGTACAATTGTCAGATGAATGTGTAAATTCTCACTACCATAGAAGAGAACAGTGTCAAGTTAACAGCCAAGGGAAATTTTACTGTGCCAATGAGACAAAAGGATTGAGCAAGGCAGGGAAAGTTGGCATAGTATTAGGCGTCGTACTGTCAAGCATCTTGATTGCTGGAATTCTCCTTTTATTGTACAAAAGAAGACGTAGTTCCTCACGTGATCAATTCCAGACAAGAAACACTTCTGCTGATCACTCTCCAGATCCAGACGGAGAAAGTGGAAGCGTGTACTTTGGAATTCCCCTTTTCTCTTACAAGGAGCTTGAAGAAGCAACAAGCCGCTTCGACCTTAATAAACAAATCGGAGATGGAGGATTTGGAACTGTCTACTATGGGAAACTCCACGATGGCCGCGAAGTCGCCGTGAAACGCTTATACGAGCACAACTACAGACGAGTTGAGCAGTTCATGAACGAAGTGCAGATCCTCACCCGTTTGCGCCACAAGAATCTTGTGTCCCTCTATGGCTGCACTTCTCGCAAGAGCCGCGAACTACTGCTTGTATATGAGTATATTCCCAACGGAACCATTGCTTCTCATCTTCATGGTGAATTAGCAAAGCCTGGCTTACTACCATGGTCAAAAAGAATCAAAATTGCTGTGGAGACTGCCAGTGCTTTAGCTTATCTCCATGCAACTGACATCATCCACCGCGACGTGAAAACCAACAATATTCTTCTTGATGACAGTTATTCTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTGTTCCCCAACGATGTTACCCATGTATCCACGGCGCCACAGGGAACTCCGGGTTATGTAGACCCGGAGTATTACCAATGCTATCAGCTTACAAGCAAGAGTGATGTGTATAGTTTTGGAGTTGTGCTTATGGAATTGATATCGTCTAAGCCAGCTGTTGATATGAGCAGAGACAAGGATGAGATTAATTTGTCAAGTCTAGCCATAAAAAAGATTCAAGAAAGTGCACTTGTTGAGCTTGTTGACCCTTCACTTGGTTTTGATTCCGACAATGAGGTTAAGAGGATGGTTGTTTCCGTGGCGGAATTGGCTTTTCAGTGTTTGCAAAGGGACAAGGACTTGAGACCTTCAATGGATAAAGTGTTGGAGGTGCTCAAGACAATTGAGAGTGGGAAGAAGAATGATGATGAGGCAGAGCATCTAGAGGTAGTAGATGGTTTACCAGGTAATGTAAATTCACCAGAATGGGACCAAATTGGGCTGGTGAAGAATGTGAAGCCACCTTCTTCGCCAGTAACTGTTACTGATAGTTGGGAAAGTAAATCCACTACACCTAACGTTAGTGGTTAA 1449 0.4334 MSSLPACTPINLPIKDFLDSQDPFTFVTANLLTLVQLSDECVNSHYHRREQCQVNSQGKFYCANETKGLSKAGKVGIVLGVVLSSILIAGILLLLYKRRRSSSRDQFQTRNTSADHSPDPDGESGSVYFGIPLFSYKELEEATSRFDLNKQIGDGGFGTVYYGKLHDGREVAVKRLYEHNYRRVEQFMNEVQILTRLRHKNLVSLYGCTSRKSRELLLVYEYIPNGTIASHLHGELAKPGLLPWSKRIKIAVETASALAYLHATDIIHRDVKTNNILLDDSYSVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLMELISSKPAVDMSRDKDEINLSSLAIKKIQESALVELVDPSLGFDSDNEVKRMVVSVAELAFQCLQRDKDLRPSMDKVLEVLKTIESGKKNDDEAEHLEVVDGLPGNVNSPEWDQIGLVKNVKPPSSPVTVTDSWESKSTTPNVSG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc32024g00001 482 MobiDBLite consensus disorder prediction 454 482 - -
Stsc32024g00001 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Stsc32024g00001 482 CDD STKc_IRAK 152 421 - -
Stsc32024g00001 482 SUPERFAMILY Protein kinase-like (PK-like) 125 418 IPR011009 -
Stsc32024g00001 482 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 120 222 - -
Stsc32024g00001 482 MobiDBLite consensus disorder prediction 105 124 - -
Stsc32024g00001 482 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 33 476 IPR044652 GO:0004672
Stsc32024g00001 482 MobiDBLite consensus disorder prediction 461 482 - -
Stsc32024g00001 482 Pfam Protein kinase domain 148 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc32024g00001 482 ProSitePatterns Protein kinases ATP-binding region signature. 152 174 IPR017441 GO:0005524
Stsc32024g00001 482 Gene3D Transferase(Phosphotransferase) domain 1 223 436 - -
Stsc32024g00001 482 Gene3D Phosphorylase Kinase; domain 1 121 222 - -
Stsc32024g00001 482 SMART serkin_6 146 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc32024g00001 482 FunFam Wall-associated receptor kinase-like 20 223 431 - -
Stsc32024g00001 482 ProSiteProfiles Protein kinase domain profile. 146 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc32024g00001 Stsc-Chr32024 5128 7687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc32024g00001 6 482 Receptor kinase-like Gene Family AT1G25390 54.678 1.83e-176 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc32024g00001 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc32024g00001 - - aip:107643858 691.419